RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 SLC2A4P14672 509 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TCF3P15923 654 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TFEBP19484 476 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 CHRM3P20309 590 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SLC15A1P46059 708 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 GTF2BQ00403 316 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 GNA12Q03113 381 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SV2CQ496J9 727 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ATF7IP2Q5U623 682 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TWF2Q6IBS0 349 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 LIN54Q6MZP7 749 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 HHIPL2Q6UWX4 724 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF517Q6ZMY9 492 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 UNC5AQ6ZN44 842 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ERMP1Q7Z2K6 904 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 EPHX4Q8IUS5 362 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 NIM1KQ8IY84 436 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 NKAPQ8N5F7 415 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 CAMKK1Q8N5S9 505 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 CPSF7Q8N684 471 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 RNF149Q8NC42 400 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 FBXO30Q8TB52 745 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PMM1Q92871 262 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SLC47A1Q96FL8 570 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 GMCL1Q96IK5 515 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 FEM1CQ96JP0 617 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 CAMKK2Q96RR4 588 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 CCSER2Q9H7U1 834 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 MAN1C1Q9NR34 630 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 KCNH7Q9NS40 1196 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 MKS1Q9NXB0 559 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TAS2R13Q9NYV9 303 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ERAP1Q9NZ08 941 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TBC1D14Q9P2M4 693 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ARHGAP28Q9P2N2 729 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 DNAJB9Q9UBS3 223 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 MOSPD1Q9UJG1 213 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PCDHGA4Q9Y5G9 962 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PMF1-BGLAPU3KQ54 211 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 A0A0J9YYE9 177 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 F8VP50 259 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 K7EPI3 171 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 AZIN1O14977 448 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ENTPD3O75355 529 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TRUB2O95900 331 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PTTG1O95997 202 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 FGRP09769 529 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 POU1F1P28069 291 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 GPSM2P81274 684 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PPP3CAQ08209 521 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PLCL1Q15111 1095 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TGFBIQ15582 683 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 HIST2H2ACQ16777 129 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PGS1Q32NB8 556 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 NDUFAF6Q330K2 333 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 DCAF6Q58WW2 860 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ARSHQ5FYA8 562 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 REP15Q6BDI9 236 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 HIST2H2AA3Q6FI13 130 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PRR5LQ6MZQ0 368 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ZPBP2Q6X784 338 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 NT5DC4Q86YG4 428 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TBC1D19Q8N5T2 526 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 EFCAB3Q8N7B9 438 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SPPL2AQ8TCT8 520 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 AURKBQ96GD4 344 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PWWP2AQ96N64 755 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 LATS2Q9NRM7 1088 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 HOXC10Q9NYD6 342 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 STOX2Q9P2F5 926 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PCDHB8Q9UN66 801 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 FNDC3AQ9Y2H6 1198 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TRAF6Q9Y4K3 522 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SNX9Q9Y5X1 595 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SNX8Q9Y5X2 465 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TECPR2O15040 1411 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ARHGAP23Q9P227 1491 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TFECO14948 347 aaPredicted RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 DFNA5O60443 496 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 REM1O75628 298 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SLC22A3O75751 556 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PGRP06401 933 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 DLDP09622 509 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 RAP2AP10114 183 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 CDK4P11802 303 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 IGFBP5P24593 272 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 GRIA2P42262 883 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TUFMP49411 452 aaKnown RBP5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ATP6V0D1P61421 351 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PRKCEQ02156 737 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 IKBKEQ14164 716 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 MAPKAPK3Q16644 382 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ZSWIM7Q19AV6 140 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 ZNF404Q494X3 552 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 PLEKHG4Q58EX7 1191 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 GLYATQ6IB77 296 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 TIFABQ6ZNK6 161 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 OFCC1Q8IZS5 231 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SPAG16Q8N0X2 631 aa5.03□□□□□ -1.6
PCDH9-203ENST00000456367 SYNE4Q8N205 404 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms