RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ADH1CP00326 375 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 FDFT1P37268 417 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 RENBPP51606 427 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 CDK16Q00536 496 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 WASHC5Q12768 1159 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 CBLBQ13191 982 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 SEPT7Q16181 437 aaKnown RBP16.04■□□□□ 0.16
SNX17-204ENST00000453453 TEX44Q53QW1 395 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 RNASEH2BQ5TBB1 312 aaKnown RBP16.04■□□□□ 0.16
SNX17-204ENST00000453453 CXorf57Q6NSI4 855 aaKnown RBP16.04■□□□□ 0.16
SNX17-204ENST00000453453 ADGRD1Q6QNK2 874 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 OTOP3Q7RTS5 596 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 PID1Q7Z2X4 250 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 PPIL6Q8IXY8 311 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 BBS5Q8N3I7 341 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 SKA1Q96BD8 255 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 ZNF599Q96NL3 588 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 MYADMQ96S97 322 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 MIPEPQ99797 713 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 LINC00597Q9H2U6 94 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 POMKQ9H5K3 350 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 RAB6BQ9NRW1 208 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 PLK2Q9NYY3 685 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 MARK1Q9P0L2 795 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 KIAA1522Q9P206 1035 aaPredicted RBP16.04■□□□□ 0.16
SNX17-204ENST00000453453 GRID1Q9ULK0 1009 aa16.04■□□□□ 0.16
SNX17-204ENST00000453453 MAP3K7O43318 606 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 KDELR3O43731 214 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 PRAMEF11O60813 436 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 PENKP01210 267 aaPredicted RBP16.03■□□□□ 0.16
SNX17-204ENST00000453453 JCHAINP01591 159 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 LAMP2P13473 410 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 ACVRL1P37023 503 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 SLC12A1Q13621 1099 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 HNRNPDQ14103 355 aaKnown RBP16.03■□□□□ 0.16
SNX17-204ENST00000453453 PDGFRLQ15198 375 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 RCN1Q15293 331 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 SKIV2LQ15477 1246 aaKnown RBP16.03■□□□□ 0.16
SNX17-204ENST00000453453 LY6G5CQ5SRR4 150 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 MTSS1LQ765P7 747 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 TMEM25Q86YD3 366 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 ADGRG2Q8IZP9 1017 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 ZNF567Q8N184 647 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 OR7D4Q8NG98 312 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 FIBINQ8TAL6 211 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 STMN2Q93045 179 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 ATP2A3Q93084 1043 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 RSPRY1Q96DX4 576 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 VPS28Q9UK41 221 aa16.03■□□□□ 0.16
SNX17-204ENST00000453453 KIF26AQ9ULI4 1882 aaPredicted RBP16.03■□□□□ 0.16
SNX17-204ENST00000453453 A0A0D9SEW6 157 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 POC1B-GALNT4F8VUJ3 575 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 KLF11O14901 512 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 GYG2O15488 501 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 ENTPD5O75356 428 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 PDHA1P08559 390 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 FCARP24071 287 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 RPS6KA3P51812 740 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 NRLP54845 237 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 ZBTB17Q13105 803 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 TBCCQ15814 346 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 THEMIS2Q5TEJ8 643 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 TMCO4Q5TGY1 634 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 MARC1Q5VT66 337 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 TRIM42Q8IWZ5 723 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 TAB3Q8N5C8 712 aaPredicted RBP16.02■□□□□ 0.16
SNX17-204ENST00000453453 USP33Q8TEY7 942 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 MYLIPQ8WY64 445 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 SPOCK2Q92563 424 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 GATA6Q92908 595 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 MCUR1Q96AQ8 359 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 ELSPBP1Q96BH3 223 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 TEKT5Q96M29 485 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 PPP1R2P1Q96PQ5 205 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 IL12RB2Q99665 862 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 C2orf49Q9BVC5 232 aaPredicted RBP16.02■□□□□ 0.16
SNX17-204ENST00000453453 CEP41Q9BYV8 373 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 SLC2A11Q9BYW1 496 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 TRIM4Q9C037 500 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 ACSS3Q9H6R3 686 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 VPS37BQ9H9H4 285 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 RBM22Q9NW64 420 aaKnown RBP eCLIP16.02■□□□□ 0.16
SNX17-204ENST00000453453 DLGAP2Q9P1A6 1054 aa16.02■□□□□ 0.16
SNX17-204ENST00000453453 MYO18AQ92614 2054 aaKnown RBP16.02■□□□□ 0.15
SNX17-204ENST00000453453 MYOFQ9NZM1 2061 aa16.02■□□□□ 0.15
SNX17-204ENST00000453453 E7ESA3 106 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 J3KR12 359 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 CBX4O00257 560 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 CHADO15335 359 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 DHRS4L1P0CG22 281 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 ADH5P11766 374 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 TYRP14679 529 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 FOSL2P15408 326 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 CSKP41240 450 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 ARFIP2P53365 341 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 RPL26P61254 145 aaKnown RBP16.01■□□□□ 0.15
SNX17-204ENST00000453453 GAD2Q05329 585 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 RCN2Q14257 317 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 PRPSAP1Q14558 356 aa16.01■□□□□ 0.15
SNX17-204ENST00000453453 ZNF235Q14590 738 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms