RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 MLPHQ9BV36 600 aaPredicted RBP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 HDAC8Q9BY41 377 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 PABPC3Q9H361 631 aaKnown RBP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 RAB6BQ9NRW1 208 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 USP36Q9P275 1121 aaKnown RBP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 FBXO4Q9UKT5 387 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 RPL26L1Q9UNX3 145 aaKnown RBP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 RAI2Q9Y5P3 530 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 LOC285095A0A1B0GVY8 99 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 MID1O15344 667 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 TTI1O43156 1089 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ZNF217O75362 1048 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 PGLSO95336 258 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ACADMP11310 421 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 TDGF1P13385 188 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 MAGEA6P43360 314 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 PSMD8P48556 350 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 SUOXP51687 545 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 CDK18Q07002 472 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 TMEM31Q5JXX7 168 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ARMC12Q5T9G4 340 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ANO7Q6IWH7 933 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ERN2Q76MJ5 926 aaKnown RBP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 MAML2Q8IZL2 1156 aaPredicted RBP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 AADATQ8N5Z0 425 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 RAB7BQ96AH8 199 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 LRRC45Q96CN5 670 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 FEM1CQ96JP0 617 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 MRGPRX2Q96LB1 330 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 TRIB3Q96RU7 358 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 CARD6Q9BX69 1037 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ETNK1Q9HBU6 452 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 ITM2CQ9NQX7 267 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 DYRK4Q9NR20 520 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 EIF2B3Q9NR50 452 aaKnown RBP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 BCCIPQ9P287 314 aaKnown RBP eCLIP11.68□□□□□ -0.54
SCN9A-204ENST00000452182 FZD4Q9ULV1 537 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 PPIL1Q9Y3C6 166 aa11.68□□□□□ -0.54
SCN9A-204ENST00000452182 PLXND1Q9Y4D7 1925 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 FAM86C2PA6NEL3 165 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 C16orf96A6NNT2 1141 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 SLC7A4O43246 635 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 RAD51CO43502 376 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 PMPCBO75439 489 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 SUN1O94901 812 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 AP2A1O95782 977 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 PRLP01236 227 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 ADRA1AP35348 466 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 DRD3P35462 400 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 METAP1P53582 386 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 WNT3AP56704 352 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 CDK16Q00536 496 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 GPS1Q13098 491 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 TRIP13Q15645 432 aaPredicted RBP11.67□□□□□ -0.54
SCN9A-204ENST00000452182 UGP2Q16851 508 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 GLE1Q53GS7 698 aaKnown RBP11.67□□□□□ -0.54
SCN9A-204ENST00000452182 CFAP58Q5T655 872 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 KIAA1324Q6UXG2 1013 aaKnown RBP11.67□□□□□ -0.54
SCN9A-204ENST00000452182 RANBP10Q6VN20 620 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 ARRDC3Q96B67 414 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 ERLEC1Q96DZ1 483 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 ADGRE3Q9BY15 652 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 FAM126AQ9BYI3 521 aaPredicted RBP11.67□□□□□ -0.54
SCN9A-204ENST00000452182 SLC6A17Q9H1V8 727 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 KDM4CQ9H3R0 1056 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 LRRC40Q9H9A6 602 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 UBP1Q9NZI7 540 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 PHTF1Q9UMS5 762 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 PCDHB9Q9Y5E1 797 aa11.67□□□□□ -0.54
SCN9A-204ENST00000452182 ZDBF2Q9HCK1 2354 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 ANKRD66B4E2M5 251 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 E7EVH7 732 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 NDST3O95803 873 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 PDHA1P08559 390 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 ADRB3P13945 408 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 HLA-DPA1P20036 260 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 TPSB2P20231 275 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 NFKBIAP25963 317 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 IVDP26440 423 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 P2RY2P41231 377 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 GRIA4P48058 902 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 TPMTP51580 245 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 NEK3P51956 506 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 CNTN1Q12860 1018 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 TPSAB1Q15661 275 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 ZNF528Q3MIS6 628 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 PIP5KL1Q5T9C9 394 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 FAXCQ5TGI0 409 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 AGBL4Q5VU57 503 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 NAPEPLDQ6IQ20 393 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 C8orf74Q6P047 294 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 PARS2Q7L3T8 475 aaKnown RBP11.66□□□□□ -0.54
SCN9A-204ENST00000452182 ZSWIM9Q86XI8 627 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 NDUFAF2Q8N183 169 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 PGBD3Q8N328 593 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 HDDC3Q8N4P3 179 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 IPMKQ8NFU5 416 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 PIH1D2Q8WWB5 315 aa11.66□□□□□ -0.54
SCN9A-204ENST00000452182 NELL1Q92832 810 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms