RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 AOAHP28039 575 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 PDIA3P30101 505 aaKnown RBP6.29□□□□□ -1.4
KARSP1-201ENST00000451871 TRHRP34981 398 aaPredicted RBP6.29□□□□□ -1.4
KARSP1-201ENST00000451871 NPTX2P47972 431 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 CCT8P50990 548 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 PDE6CP51160 858 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 AFF3P51826 1226 aaKnown RBP6.29□□□□□ -1.4
KARSP1-201ENST00000451871 RPL10AP62906 217 aaKnown RBP6.29□□□□□ -1.4
KARSP1-201ENST00000451871 PPP3CAQ08209 521 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 DNAJC3Q13217 504 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 KRT32Q14532 448 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 CALCRLQ16602 461 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 EARS2Q5JPH6 523 aaKnown RBP6.29□□□□□ -1.4
KARSP1-201ENST00000451871 C10orf76Q5T2E6 689 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 SPATA1Q5VX52 437 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 TERB1Q8NA31 727 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 NUP43Q8NFH3 380 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 HDAC10Q969S8 669 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 HIC2Q96JB3 615 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 ITM2CQ9NQX7 267 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 ARHGAP28Q9P2N2 729 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 DEC1Q9P2X7 70 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 ACSL6Q9UKU0 697 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 RAD54BQ9Y620 910 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 DOCK9Q9BZ29 2069 aa6.29□□□□□ -1.4
KARSP1-201ENST00000451871 KIF26BQ2KJY2 2108 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 KCNJ18B7U540 433 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 F8W8V4 182 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 PIRO00625 290 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 TRIM24O15164 1050 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 KLK10O43240 276 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 TOM1L1O75674 476 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 AFPP02771 609 aaKnown RBP6.28□□□□□ -1.4
KARSP1-201ENST00000451871 TSHRP16473 764 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 TNFAIP3P21580 790 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 GLDCP23378 1020 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 MAN1A1P33908 653 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 SLC7A9P82251 487 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 IL9RQ01113 521 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 GAD2Q05329 585 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 PMS2P11Q13670 270 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 SLC14A2Q15849 920 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 KIAA1614Q5VZ46 1190 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 C9orf57Q5W0N0 161 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 WSCD1Q658N2 575 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 HIST2H2BCQ6DN03 193 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 KLHDC10Q6PID8 442 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 DHX40Q8IX18 779 aaKnown RBP6.28□□□□□ -1.4
KARSP1-201ENST00000451871 FBXL16Q8N461 479 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 GLB1L3Q8NCI6 653 aaPredicted RBP6.28□□□□□ -1.4
KARSP1-201ENST00000451871 PHOSPHO1Q8TCT1 267 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 FATE1Q969F0 183 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 CNDP2Q96KP4 475 aaKnown RBP6.28□□□□□ -1.4
KARSP1-201ENST00000451871 ZNF578Q96N58 590 aaPredicted RBP6.28□□□□□ -1.4
KARSP1-201ENST00000451871 MTMR9Q96QG7 549 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 GABRG3Q99928 467 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 LRRC27Q9C0I9 530 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 RPF1Q9H9Y2 349 aaKnown RBP6.28□□□□□ -1.4
KARSP1-201ENST00000451871 SCOCQ9UIL1 159 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 PCDHB6Q9Y5E3 794 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 CPQQ9Y646 472 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 SLCO1B1Q9Y6L6 691 aa6.28□□□□□ -1.4
KARSP1-201ENST00000451871 MED13LQ71F56 2210 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 RP1L1Q8IWN7 2480 aaPredicted RBP6.27□□□□□ -1.41
KARSP1-201ENST00000451871 WASH3PC4AMC7 463 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 K7ENP7 123 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 CLDN3O15551 220 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 SUV39H1O43463 412 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 RHOBTB3O94955 611 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 PYGLP06737 847 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 GLI4P10075 376 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 KITP10721 976 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 RPA1P27694 616 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 OXTRP30559 389 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 ACADVLP49748 655 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 TPMTP51580 245 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 CHRNEQ04844 493 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 KCNT1Q5JUK3 1230 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 KLHDC7AQ5VTJ3 777 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 GALNT18Q6P9A2 607 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 INO80CQ6PI98 192 aaPredicted RBP6.27□□□□□ -1.41
KARSP1-201ENST00000451871 KRBA2Q6ZNG9 492 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 SH2D3CQ8N5H7 860 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 EXD3Q8N9H8 876 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 PPHLN1Q8NEY8 458 aaKnown RBP6.27□□□□□ -1.41
KARSP1-201ENST00000451871 SKA1Q96BD8 255 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 TBC1D20Q96BZ9 403 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 CDK5RAP3Q96JB5 506 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 TSPAN18Q96SJ8 248 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 PYM1Q9BRP8 204 aaKnown RBP6.27□□□□□ -1.41
KARSP1-201ENST00000451871 NUP58Q9BVL2 599 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 AGXT2Q9BYV1 514 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 DPH1Q9BZG8 443 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 HAPLN2Q9GZV7 340 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 BTBD1Q9H0C5 482 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 ZNF768Q9H5H4 540 aaKnown RBP6.27□□□□□ -1.41
KARSP1-201ENST00000451871 MBNL3Q9NUK0 354 aaKnown RBP6.27□□□□□ -1.41
KARSP1-201ENST00000451871 SMPD4Q9NXE4 827 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 CFAP97Q9P2B7 532 aa6.27□□□□□ -1.41
KARSP1-201ENST00000451871 TBC1D14Q9P2M4 693 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms