RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.15□□□□□ -0.3
VPS33A-202ENST00000451053 USP30Q70CQ3 517 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 ERN2Q76MJ5 926 aaKnown RBP13.15□□□□□ -0.3
VPS33A-202ENST00000451053 GPR161Q8N6U8 529 aaKnown RBP13.15□□□□□ -0.3
VPS33A-202ENST00000451053 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 GLIS1Q8NBF1 620 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 ZBTB44Q8NCP5 570 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 FAM131CQ96AQ9 280 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 TADA1Q96BN2 335 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 ECHDC3Q96DC8 303 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 OXNAD1Q96HP4 312 aaPredicted RBP13.15□□□□□ -0.3
VPS33A-202ENST00000451053 ZNF641Q96N77 438 aaPredicted RBP13.15□□□□□ -0.3
VPS33A-202ENST00000451053 LRRC1Q9BTT6 524 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 DYRK4Q9NR20 520 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 DKK3Q9UBP4 350 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 MBD1Q9UIS9 605 aaPredicted RBP13.15□□□□□ -0.3
VPS33A-202ENST00000451053 RAI2Q9Y5P3 530 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 ANKRD36A6QL64 1941 aa13.15□□□□□ -0.3
VPS33A-202ENST00000451053 TTI1O43156 1089 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 HTRA2O43464 458 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 HRO43593 1189 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 OPHN1O60890 802 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 SOCS5O75159 536 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 GCATO75600 419 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 HEXIM1O94992 359 aaKnown RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 MT-CYBP00156 380 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 SERPINF2P08697 491 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 RHOXF2BP0C7M4 288 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 ADRB3P13945 408 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 TIMP2P16035 220 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 BCKDHBP21953 392 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PSMB4P28070 264 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 CD6P30203 668 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 ACSL1P33121 698 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 ABL2P42684 1182 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PTGIRP43119 386 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 NEK3P51956 506 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PTK6Q13882 451 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 P3H1Q32P28 736 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 USP39Q53GS9 565 aaKnown RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 ITPRIPL1Q6GPH6 555 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 ARHGEF18Q6ZSZ5 1173 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 KBTBD6Q86V97 674 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 JAMLQ86YT9 394 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 TAB3Q8N5C8 712 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PDCD6IPQ8WUM4 868 aaKnown RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 GAB3Q8WWW8 586 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 TOE1Q96GM8 510 aaKnown RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 SPACA7Q96KW9 195 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 FCRL5Q96RD9 977 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PRRX2Q99811 253 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 RHOXF2Q9BQY4 288 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 HDAC8Q9BY41 377 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PCDH9Q9HC56 1237 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 WSB2Q9NYS7 404 aaPredicted RBP13.14□□□□□ -0.31
VPS33A-202ENST00000451053 UBP1Q9NZI7 540 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 FZD4Q9ULV1 537 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 NCKAP1Q9Y2A7 1128 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PCDHGA2Q9Y5H1 932 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 CUL9Q8IWT3 2517 aa13.14□□□□□ -0.31
VPS33A-202ENST00000451053 PLXND1Q9Y4D7 1925 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 UPK3BL1B0FP48 263 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 UPK3BL2E5RIL1 263 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 SPINT1O43278 529 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PLRG1O43660 514 aaKnown RBP13.13□□□□□ -0.31
VPS33A-202ENST00000451053 LILRB5O75023 590 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PMPCBO75439 489 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 RPP40O75818 363 aaKnown RBP13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PGLSO95336 258 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 CPP00450 1065 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PRLP01236 227 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 KRT14P02533 472 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PRKCGP05129 697 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PDHA1P08559 390 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 ZSCAN5DPP0CG00 497 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 ITIH2P19823 946 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 OXTRP30559 389 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 ADPRHP54922 357 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 TAS2R38P59533 333 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 SFSWAPQ12872 951 aaKnown RBP13.13□□□□□ -0.31
VPS33A-202ENST00000451053 SLC14A2Q15849 920 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 ERCC6LQ2NKX8 1250 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 CFAP58Q5T655 872 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 FAXCQ5TGI0 409 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 BRAT1Q6PJG6 821 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 KDELC1Q6UW63 502 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 IFT20Q8IY31 132 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PAF1Q8N7H5 531 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 OR14C36Q8NHC7 312 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 HCAR2Q8TDS4 363 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 ERP44Q9BS26 406 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 MLPHQ9BV36 600 aaPredicted RBP13.13□□□□□ -0.31
VPS33A-202ENST00000451053 TDRD1Q9BXT4 1180 aaKnown RBP13.13□□□□□ -0.31
VPS33A-202ENST00000451053 ASIC3Q9UHC3 531 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 GGT7Q9UJ14 662 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 CHKBQ9Y259 395 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 ITM2BQ9Y287 266 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 PCDHB9Q9Y5E1 797 aa13.13□□□□□ -0.31
VPS33A-202ENST00000451053 R4GN57 208 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms