RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 HOXB1P14653 301 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 KDELR1P24390 212 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 FASP25445 335 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 RRM2P31350 389 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 EIF2DP41214 584 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 RPL14P50914 215 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 PPP5CP53041 499 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 GSTO1P78417 241 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 CNTN2Q02246 1040 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 SLC25A11Q02978 314 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 TNFAIP2Q03169 654 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 NAB1Q13506 487 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 SNX17Q15036 470 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 TAZQ16635 292 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 DGUOKQ16854 277 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 SAMD4BQ5PRF9 694 aaKnown RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 TREML2Q5T2D2 321 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ATAD3CQ5T2N8 411 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 LDLRAD1Q5T700 205 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 KIAA1841Q6NSI8 718 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 IDO2Q6ZQW0 420 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 GK5Q6ZS86 529 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 SPRED1Q7Z699 444 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 USP37Q86T82 979 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 CCDC103Q8IW40 242 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 MPP5Q8N3R9 675 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 POC5Q8NA72 575 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 LINC00116Q8NCU8 138 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 FLAD1Q8NFF5 587 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 OR7A2PQ8NGA2 310 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 CENPNQ96H22 339 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 DACH2Q96NX9 599 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 DGCR6LQ9BY27 220 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ZNF717Q9BY31 904 aaPredicted RBP8.69□□□□□ -1.02
LSM5-208ENST00000450169 PLEKHA5Q9HAU0 1116 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 ADPRHL2Q9NX46 363 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 SLC17A6Q9P2U8 582 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 CD300AQ9UGN4 299 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 SLCO3A1Q9UIG8 710 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 PCDHA11Q9Y5I1 949 aa8.69□□□□□ -1.02
LSM5-208ENST00000450169 TAF1P21675 1872 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ZNF831Q5JPB2 1677 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 E2F8A0AVK6 867 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 M0R3G1 203 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ERVH48-1M5A8F1 160 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 POLR1CO15160 346 aaPredicted RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 H2AFYO75367 372 aaKnown RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 CALB1P05937 261 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ATP6V1B2P21281 511 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 IL1R2P27930 398 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ADORA2AP29274 412 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 TYK2P29597 1187 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 GMPRP36959 345 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 RPS9P46781 194 aaKnown RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 HK2P52789 917 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 SNRPFP62306 86 aaKnown RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 STX5Q13190 355 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ZFP69Q49AA0 526 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 BRDTQ58F21 947 aaPredicted RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 GLRA4Q5JXX5 417 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 TMEM270Q6UE05 265 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 PRR23CQ6ZRP0 262 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 UBE2Q1Q7Z7E8 422 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 GLRX5Q86SX6 157 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ADCK1Q86TW2 530 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 LDHDQ86WU2 507 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 GALNT12Q8IXK2 581 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 DDIASQ8IXT1 998 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 SPARTQ8N0X7 666 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 OR6F1Q8NGZ6 308 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 BRSK1Q8TDC3 778 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 JPH3Q8WXH2 748 aaPredicted RBP8.68□□□□□ -1.02
LSM5-208ENST00000450169 TTC9Q92623 222 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 SH2D3AQ9BRG2 576 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 AIFM2Q9BRQ8 373 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 LRRC40Q9H9A6 602 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 TRIM39Q9HCM9 518 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 ZNF358Q9NW07 568 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 CACNA2D2Q9NY47 1150 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 MOCS1Q9NZB8 636 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 BAG5Q9UL15 447 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 VWA7Q9Y334 891 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 RAP2CQ9Y3L5 183 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 TCRBV5S1A1TA0A578 114 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 DHRS12A0PJE2 317 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 GRID2O43424 1007 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 TSPAN1O60635 241 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 TRIM13O60858 407 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 SNAP29O95721 258 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 PTTG1O95997 202 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 GLULP15104 373 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 IL10P22301 178 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 NUDT1P36639 197 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 GRIK1P39086 918 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 MAGEA3P43357 314 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 SEPHS1P49903 392 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 PRELPP51888 382 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 TAP1Q03518 808 aa8.68□□□□□ -1.02
LSM5-208ENST00000450169 NIPAL4Q0D2K0 466 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms