RNA–Protein interactions for RNA: ENST00000450148.5

MSH5-209, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-209ENST00000450148 SRLQ86TD4 932 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 VPS36Q86VN1 386 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 PARGQ86W56 976 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 CAMK1DQ8IU85 385 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 CACTIN-AS1Q8N1I8 211 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 PDCD7Q8N8D1 485 aaKnown RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 NIPA2Q8N8Q9 360 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 FAM181AQ8N9Y4 354 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 ZNF548Q8NEK5 533 aaPredicted RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 ECHDC3Q96DC8 303 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 BTBD6Q96KE9 485 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 APOLD1Q96LR9 279 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 ZNF641Q96N77 438 aaPredicted RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 TUBGCP5Q96RT8 1024 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 NCAPGQ9BPX3 1015 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 WRAP53Q9BUR4 548 aaKnown RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 TCEAL2Q9H3H9 227 aaPredicted RBP12.48□□□□□ -0.41
MSH5-209ENST00000450148 DNAJC28Q9NX36 388 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 NLGN3Q9NZ94 848 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 IFNKQ9P0W0 207 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 COQ6Q9Y2Z9 468 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 CFAP47Q6ZTR5 3102 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 DMXL2Q8TDJ6 3036 aa12.48□□□□□ -0.41
MSH5-209ENST00000450148 K7ESM1 405 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 TRAFD1O14545 582 aaPredicted RBP12.47□□□□□ -0.41
MSH5-209ENST00000450148 RIOK3O14730 519 aaKnown RBP12.47□□□□□ -0.41
MSH5-209ENST00000450148 DAPK3O43293 454 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 PALMO75781 387 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 CKMT1AP12532 417 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 MYF5P13349 255 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 AMPD1P23109 780 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 HNRNPH3P31942 346 aaKnown RBP12.47□□□□□ -0.41
MSH5-209ENST00000450148 MMP12P39900 470 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 YPEL5P62699 121 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 NSUN2Q08J23 767 aaKnown RBP eCLIP12.47□□□□□ -0.41
MSH5-209ENST00000450148 ELP6Q0PNE2 266 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 RALGDSQ12967 914 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 PIGHQ14442 188 aaPredicted RBP12.47□□□□□ -0.41
MSH5-209ENST00000450148 AGERQ15109 404 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 ZSCAN23Q3MJ62 389 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 BOLA3Q53S33 107 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 LZTR1Q8N653 840 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 FAM71BQ8TC56 605 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 CXorf40AQ8TE69 158 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 CPLX3Q8WVH0 158 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 IQCDQ96DY2 449 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 CSPG4P5Q96PW8 444 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.47□□□□□ -0.41
MSH5-209ENST00000450148 PCDH12Q9NPG4 1184 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 IPO11Q9UI26 975 aaKnown RBP12.47□□□□□ -0.41
MSH5-209ENST00000450148 GPSM3Q9Y4H4 160 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 CSNK1G3Q9Y6M4 447 aa12.47□□□□□ -0.41
MSH5-209ENST00000450148 DFFAO00273 331 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 PRKCGP05129 697 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 C6P13671 934 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 JUPP14923 745 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 JUNDP17535 347 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 GM2AP17900 193 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 CR2P20023 1033 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 IL4RP24394 825 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 CASP14P31944 242 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 ARSEP51690 589 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 TPM4P67936 248 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 SLC10A7Q0GE19 358 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 TARDBPQ13148 414 aaKnown RBP eCLIP12.46□□□□□ -0.41
MSH5-209ENST00000450148 RFTN1Q14699 578 aaPredicted RBP12.46□□□□□ -0.41
MSH5-209ENST00000450148 IRF4Q15306 451 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 WSCD2Q2TBF2 565 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 ALKBH5Q6P6C2 394 aaKnown RBP12.46□□□□□ -0.41
MSH5-209ENST00000450148 BRAT1Q6PJG6 821 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 NYAP1Q6ZVC0 841 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 CPNE8Q86YQ8 564 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 RBFAQ8N0V3 343 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 DCBLD1Q8N8Z6 715 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 TEKT4Q8WW24 435 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 PSKH2Q96QS6 385 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 NUP85Q9BW27 656 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 XPO4Q9C0E2 1151 aaKnown RBP12.46□□□□□ -0.41
MSH5-209ENST00000450148 ZWILCHQ9H900 591 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 SP110Q9HB58 689 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 PCDH18Q9HCL0 1135 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 ANAPC7Q9UJX3 599 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 ATP8A1Q9Y2Q0 1164 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 RAXQ9Y2V3 346 aa12.46□□□□□ -0.41
MSH5-209ENST00000450148 LUC7L2Q9Y383 392 aaKnown RBP12.46□□□□□ -0.41
MSH5-209ENST00000450148 ZZEF1O43149 2961 aa12.46□□□□□ -0.42
MSH5-209ENST00000450148 FAM208BQ5VWN6 2430 aa12.46□□□□□ -0.42
MSH5-209ENST00000450148 NEMP2A6NFY4 417 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 GOLGA6L19H0YKK7 550 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 H3BM21 787 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 H3BRJ5 948 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 TOR1BO14657 336 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 AQP9O43315 295 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 MAFKO60675 156 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 GCATO75600 419 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 HNF1BP35680 557 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 EIF4A3P38919 411 aaKnown RBP12.45□□□□□ -0.42
MSH5-209ENST00000450148 LIG3P49916 1009 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 DAB2P98082 770 aa12.45□□□□□ -0.42
MSH5-209ENST00000450148 E2F1Q01094 437 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms