RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 TUBGCP5Q96RT8 1024 aa13.49□□□□□ -0.25
SNHG4-201ENST00000448190 MGME1Q9BQP7 344 aa13.49□□□□□ -0.25
SNHG4-201ENST00000448190 NUSAP1Q9BXS6 441 aaKnown RBP13.49□□□□□ -0.25
SNHG4-201ENST00000448190 PREBQ9HCU5 417 aa13.49□□□□□ -0.25
SNHG4-201ENST00000448190 PCDH12Q9NPG4 1184 aa13.49□□□□□ -0.25
SNHG4-201ENST00000448190 DKK3Q9UBP4 350 aa13.49□□□□□ -0.25
SNHG4-201ENST00000448190 OTOGLQ3ZCN5 2332 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 A0A0U1RQS6 177 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 LNP1A1A4G5 178 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 C4orf47A7E2U8 309 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 MIF4GDA9UHW6 222 aaKnown RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 TRAFD1O14545 582 aaPredicted RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 PPP1R12AO14974 1030 aaPredicted RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 AREL1O15033 823 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 ENGP17813 658 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 HSPA9P38646 679 aaKnown RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 CLDN2P57739 230 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 AP1S1P61966 158 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 OTUD4Q01804 1114 aaKnown RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 BNC1Q01954 994 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 TRAF2Q12933 501 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 FGL2Q14314 439 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 GRM3Q14832 879 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 RPS6KA1Q15418 735 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 MEI1Q5TIA1 1274 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 PEAR1Q5VY43 1037 aaPredicted RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 SLC23A3Q6PIS1 610 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 BZW1Q7L1Q6 419 aaKnown RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 KDELC2Q7Z4H8 507 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 ADAT2Q7Z6V5 191 aaKnown RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 REXO1L1PQ8IX06 675 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 GPR161Q8N6U8 529 aaKnown RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 ARRDC2Q8TBH0 407 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 IL12RB2Q99665 862 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 SLC17A9Q9BYT1 436 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 POLR1EQ9GZS1 481 aaKnown RBP13.48□□□□□ -0.25
SNHG4-201ENST00000448190 CAPN10Q9HC96 672 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 ATP8A1Q9Y2Q0 1164 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 COQ6Q9Y2Z9 468 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 RAI2Q9Y5P3 530 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 DOCK4Q8N1I0 1966 aa13.48□□□□□ -0.25
SNHG4-201ENST00000448190 CKAP5Q14008 2032 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.47□□□□□ -0.25
SNHG4-201ENST00000448190 UPK3BL1B0FP48 263 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 C10orf142B7Z368 130 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 UPK3BL2E5RIL1 263 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 RAD51BO15315 384 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 LATO43561 262 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 AP1G1O43747 822 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 WNT1P04628 370 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 PDHA1P08559 390 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 CTPS1P17812 591 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 CD86P42081 329 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
SNHG4-201ENST00000448190 RPS21P63220 83 aaKnown RBP13.47□□□□□ -0.25
SNHG4-201ENST00000448190 IFI35P80217 286 aaPredicted RBP13.47□□□□□ -0.25
SNHG4-201ENST00000448190 SGCGQ13326 291 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 PRKD1Q15139 912 aaPredicted RBP13.47□□□□□ -0.25
SNHG4-201ENST00000448190 RSPO4Q2I0M5 234 aaPredicted RBP13.47□□□□□ -0.25
SNHG4-201ENST00000448190 KIF19Q2TAC6 998 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 UAP1L1Q3KQV9 507 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 NEK5Q6P3R8 708 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 KDM7AQ6ZMT4 941 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 ZNF662Q6ZS27 426 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 TRIM69Q86WT6 500 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 ACTL9Q8TC94 416 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 HCAR2Q8TDS4 363 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 CXorf40AQ8TE69 158 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 FATE1Q969F0 183 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 RAB7BQ96AH8 199 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 RBM15Q96T37 977 aaKnown RBP eCLIP13.47□□□□□ -0.255e-8■■■■■ 26.8
SNHG4-201ENST00000448190 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 SUSD2Q9UGT4 822 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 CHKBQ9Y259 395 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 ANKRD6Q9Y2G4 727 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 SNX11Q9Y5W9 270 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 GON4LQ3T8J9 2241 aa13.47□□□□□ -0.25
SNHG4-201ENST00000448190 H0Y8X5 98 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 ARHGAP33O14559 1287 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 CDX4O14627 284 aaPredicted RBP13.46□□□□□ -0.25
SNHG4-201ENST00000448190 RIOK3O14730 519 aaKnown RBP13.46□□□□□ -0.25
SNHG4-201ENST00000448190 TSPAN6O43657 245 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 TJP3O95049 919 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 MMP2P08253 660 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 PTPN3P26045 913 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 RBL1P28749 1068 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 HOXD12P35452 270 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 DPP6P42658 865 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 LIG3P49916 1009 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 ATXN3P54252 364 aaPredicted RBP13.46□□□□□ -0.25
SNHG4-201ENST00000448190 EIF3EP60228 445 aaKnown RBP13.46□□□□□ -0.25
SNHG4-201ENST00000448190 RACK1P63244 317 aaKnown RBP13.46□□□□□ -0.25
SNHG4-201ENST00000448190 LMNB2Q03252 620 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 WASHC5Q12768 1159 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 GRIK2Q13002 908 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 STAT4Q14765 748 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 TMEM259Q4ZIN3 620 aa13.46□□□□□ -0.25
SNHG4-201ENST00000448190 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
SNHG4-201ENST00000448190 TEX44Q53QW1 395 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms