RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 SLC15A2Q16348 729 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 BMT2Q1RMZ1 405 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PYDC2Q56P42 97 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 NBPF12Q5TAG4 269 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TXNDC11Q6PKC3 985 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 AFTPHQ6ULP2 937 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 OLFML1Q6UWY5 402 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 APTXQ7Z2E3 356 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 PROSER1Q86XN7 944 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 OR52L1Q8NGH7 329 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 AP3S1Q92572 193 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 HOPXQ9BPY8 73 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 COMMD9Q9P000 198 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 EGFL7Q9UHF1 273 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 MAGEL2Q9UJ55 1249 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SYNPO2Q9UMS6 1093 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF232Q9UNY5 417 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 RWDD3Q9Y3V2 267 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CCDC162PA2VCL2 907 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CAPN8A6NHC0 703 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 FFAR3O14843 346 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 GPR42O15529 346 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 BUD23O43709 281 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ECDO95905 644 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 NELFEP18615 380 aaKnown RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TSPAN8P19075 237 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 HIRAP54198 1017 aaPredicted RBP7.83□□□□□ -1.16
NEDD9-204ENST00000448183 RHAGQ02094 409 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 LPIN1Q14693 890 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 LIN54Q6MZP7 749 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 COMMD2Q86X83 199 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ECHDC2Q86YB7 292 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TMEM139Q8IV31 216 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SMYD1Q8NB12 490 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 MCFD2Q8NI22 146 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 CD101Q93033 1021 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SPATA5L1Q9BVQ7 753 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TMEM106CQ9BVX2 250 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 IDI2Q9BXS1 227 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 ASB8Q9H765 288 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 GNPTGQ9UJJ9 305 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SLC12A4Q9UP95 1085 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 TNFSF13BQ9Y275 285 aa7.83□□□□□ -1.16
NEDD9-204ENST00000448183 SSNA1O43805 119 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TGDSO95455 350 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 NR2F6P10588 404 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ZC3H12AQ5D1E8 599 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 FAM171A1Q5VUB5 890 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 POTEHQ6S545 545 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 USP45Q70EL2 814 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PIGZQ86VD9 579 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 RBM15BQ8NDT2 890 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SLC44A1Q8WWI5 657 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 NELL1Q92832 810 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 MLPHQ9BV36 600 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 RPRD1BQ9NQG5 326 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SSR3Q9UNL2 185 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 NWD1Q149M9 1564 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 MAGEC1O60732 1142 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SHOX2O60902 331 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 AVILO75366 819 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PRG2P13727 222 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ERCC2P18074 760 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TUFMP49411 452 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 OLR1P78380 273 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 BLMHQ13867 455 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ACOX1Q15067 660 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 RNF220Q5VTB9 566 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CYP20A1Q6UW02 462 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SCIMPQ6UWF3 145 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CMC1Q7Z7K0 106 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PEG10Q86TG7 708 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ZC3H7AQ8IWR0 971 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ANKRD52Q8NB46 1076 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ZFP28Q8NHY6 868 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 LGMNQ99538 433 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 RHOJQ9H4E5 214 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 DDX4Q9NQI0 724 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PRDM8Q9NQV8 689 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 WBP11Q9Y2W2 641 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PLLPQ9Y342 182 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 MRPL42Q9Y6G3 142 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 A0A088AWK7 358 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 H3BNX3 289 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 RNF225M0QZC1 329 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TRMUO75648 421 aaKnown RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CKBP12277 381 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 GOT1P17174 413 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF10P21506 573 aaPredicted RBP7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CAPGP40121 348 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 GALK1P51570 392 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TGFB2P61812 414 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CYP4F2P78329 520 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CYP4F3Q08477 520 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 SREBF2Q12772 1141 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 BIKQ13323 160 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 PPIL2Q13356 520 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 CTBP1Q13363 440 aa7.82□□□□□ -1.16
NEDD9-204ENST00000448183 TIGD2Q4W5G0 525 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms