RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 MRPL41Q8IXM3 137 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 UNC5BQ8IZJ1 945 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 NLGN4XQ8N0W4 816 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 KYQ8NBH2 561 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 NLGN4YQ8NFZ3 816 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 LMX1AQ8TE12 382 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 DDI1Q8WTU0 396 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PNPLA2Q96AD5 504 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 TTC17Q96AE7 1141 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 LMLNQ96KR4 655 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 BMFQ96LC9 184 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 AIFM3Q96NN9 605 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 MYOCQ99972 504 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 MSTO1Q9BUK6 570 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 TRIM55Q9BYV6 548 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 LSG1Q9H089 658 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 FZD3Q9NPG1 666 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 TLR8Q9NR97 1041 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 ABCB8Q9NUT2 735 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 ASF1BQ9NVP2 202 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 LUZP4Q9P127 313 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 APPL1Q9UKG1 709 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 POLHQ9Y253 713 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 A6NNZ2 444 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CLDN5O00501 218 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 YY2O15391 372 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PDGFRBP09619 1106 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 OR52Z1P0C646 297 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PLS3P13797 630 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PLCG1P19174 1290 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 F8A1P23610 371 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CORO1AP31146 461 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 AKT2P31751 481 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CSTF2P33240 577 aaKnown RBP eCLIP3.35□□□□□ -1.87
PMS1-215ENST00000447232 ACOT2P49753 483 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 LIG4P49917 911 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PGDP52209 483 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 ADKP55263 362 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 FOXD4Q12950 439 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 EIF2B5Q13144 721 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 SEMA5AQ13591 1074 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CRB2Q5IJ48 1285 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 TPRG1LQ5T0D9 272 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 OR6B2Q6IFH4 312 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CRELD2Q6UXH1 353 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 KYAT3Q6YP21 454 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 BNC2Q6ZN30 1099 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 C1orf186Q6ZWK4 172 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 HS2ST1Q7LGA3 356 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 RBFAQ8N0V3 343 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 WFDC5Q8TCV5 224 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 COX4I2Q96KJ9 171 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 ALPK1Q96QP1 1244 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 DPH2Q9BQC3 489 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 LRRC61Q9BV99 259 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 B3GNT5Q9BYG0 378 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 CLPBQ9H078 707 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 TCEAL2Q9H3H9 227 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 MCCC2Q9HCC0 563 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 SLAMF7Q9NQ25 335 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.35□□□□□ -1.87
PMS1-215ENST00000447232 SPASTQ9UBP0 616 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 SIX4Q9UIU6 781 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 KCNG1Q9UIX4 513 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 PNMA8BQ9ULN7 279 aaPredicted RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 KCNJ14Q9UNX9 436 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 HS3ST3A1Q9Y663 406 aa3.35□□□□□ -1.87
PMS1-215ENST00000447232 MRPS18BQ9Y676 258 aaKnown RBP3.35□□□□□ -1.87
PMS1-215ENST00000447232 EDDM13A0A1B0GTR0 161 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 A0A1W2PQU0 124 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 POM121BA6NF01 834 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 ZSCAN5CA6NGD5 496 aaPredicted RBP3.34□□□□□ -1.87
PMS1-215ENST00000447232 HNRNPDLO14979 420 aaKnown RBP3.34□□□□□ -1.87
PMS1-215ENST00000447232 KCNN4O15554 427 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 NEMFO60524 1076 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 LRCH4O75427 683 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 DEXIO95424 95 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 ESR1P03372 595 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 KRT1P04264 644 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 PNLIPP16233 465 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 POLR2EP19388 210 aaKnown RBP3.34□□□□□ -1.87
PMS1-215ENST00000447232 TFE3P19532 575 aaPredicted RBP3.34□□□□□ -1.87
PMS1-215ENST00000447232 CD70P32970 193 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 KIR3DL1P43629 444 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 NCKAP1LP55160 1127 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 ELAVL3Q14576 367 aaKnown RBP3.34□□□□□ -1.87
PMS1-215ENST00000447232 MPPE1Q53F39 396 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 PHF19Q5T6S3 580 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 RINT1Q6NUQ1 792 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 NEK5Q6P3R8 708 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 ZNF517Q6ZMY9 492 aaPredicted RBP3.34□□□□□ -1.87
PMS1-215ENST00000447232 PAQR9Q6ZVX9 377 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 SPRED1Q7Z699 444 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 BIVMQ86UB2 503 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 TMEM135Q86UB9 458 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 MCATQ8IVS2 390 aaKnown RBP3.34□□□□□ -1.87
PMS1-215ENST00000447232 SMC5Q8IY18 1101 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 STK40Q8N2I9 435 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 NXPE1Q8N323 547 aa3.34□□□□□ -1.87
PMS1-215ENST00000447232 RBMXL3Q8N7X1 1067 aaKnown RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms