RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ZCCHC23Q6ZST2 131 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 ADGRG6Q86SQ4 1221 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 DCLK2Q8N568 766 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 RILPQ96NA2 401 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 MTRRQ9UBK8 725 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 DNMT3LQ9UJW3 386 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 ADAMTS6Q9UKP5 1117 aa14.29□□□□□ -0.12
LIMD1-202ENST00000440097 VAPBO95292 243 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 IRF1P10914 325 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 CD86P42081 329 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 PCID2Q5JVF3 399 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 ARTNQ5T4W7 220 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 TEDDM1Q5T9Z0 273 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 ATG16L1Q676U5 607 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SLC8B1Q6J4K2 584 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 FSTL4Q6MZW2 842 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 AAGABQ6PD74 315 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 TRIM42Q8IWZ5 723 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 C7orf26Q96N11 449 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 RBBP8Q99708 897 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 OXCT2Q9BYC2 517 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-202ENST00000440097 KLHL4Q9C0H6 718 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 CAB39LQ9H9S4 337 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 ENTPD7Q9NQZ7 604 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SNX15Q9NRS6 342 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 PRRG1O14668 218 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 GLRA3O75311 464 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 PGM3O95394 542 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 PIM1P11309 404 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-202ENST00000440097 VCLP18206 1134 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 PEX2P28328 305 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 CPOXP36551 454 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 ALDH1A3P47895 512 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SH3BGRP55822 239 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-202ENST00000440097 WNT3AP56704 352 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SLC25A3Q00325 362 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 TIFABQ6ZNK6 161 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 PPP1R2P1Q96PQ5 205 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 HSFX1Q9UBD0 423 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 COL4A4P53420 1690 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-202ENST00000440097 hCG_2014768A0A024R1R8 64 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SMIM31A0A1B0GVY4 71 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 WASH4PA8MWX3 477 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 TXNDC9O14530 226 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 GJB5O95377 273 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 TACR2P21452 398 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 KPNA1P52294 538 aaPredicted RBP14.28□□□□□ -0.12
LIMD1-202ENST00000440097 PDK3Q15120 406 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 AFMIDQ63HM1 303 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 CNKSR3Q6P9H4 555 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 DENND1CQ8IV53 801 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 ACMSDQ8TDX5 336 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SLC26A7Q8TE54 656 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 GDPD5Q8WTR4 605 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 DNAJC1Q96KC8 554 aaKnown RBP14.28□□□□□ -0.12
LIMD1-202ENST00000440097 VN1R3Q9BXE9 311 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 DCDC2Q9UHG0 476 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SLC39A10Q9ULF5 831 aa14.28□□□□□ -0.12
LIMD1-202ENST00000440097 SORBS2O94875 1100 aaKnown RBP14.27□□□□□ -0.12
LIMD1-202ENST00000440097 SEC24AO95486 1093 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 IMPDH2P12268 514 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 ACVRL1P37023 503 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 DSC2Q02487 901 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 RING1Q06587 406 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 PLD1Q13393 1074 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 BTG3Q14201 252 aaPredicted RBP14.27□□□□□ -0.12
LIMD1-202ENST00000440097 MMEL1Q495T6 779 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 PDPK2PQ6A1A2 396 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 ESRP1Q6NXG1 681 aaKnown RBP14.27□□□□□ -0.12
LIMD1-202ENST00000440097 PKN3Q6P5Z2 889 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 ZNF683Q8IZ20 524 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 AUTS2Q8WXX7 1259 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 MYEOVQ96EZ4 313 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 CLSTN3Q9BQT9 956 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 EBF4Q9BQW3 602 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 SPON2Q9BUD6 331 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 C1orf21Q9H246 121 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 CWH43Q9H720 699 aa14.27□□□□□ -0.12
LIMD1-202ENST00000440097 SCAMP3O14828 347 aaKnown RBP14.27□□□□□ -0.13
LIMD1-202ENST00000440097 CACNG3O60359 315 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 SLC11A2P49281 568 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 SERPINB8P50452 374 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 LIMK2P53671 638 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 DLG2Q15700 870 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 CNGA3Q16281 694 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 FASTKD1Q53R41 847 aaKnown RBP14.27□□□□□ -0.13
LIMD1-202ENST00000440097 HECTD3Q5T447 861 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 IL31Q6EBC2 164 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 NADSYN1Q6IA69 706 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF461Q8TAF7 563 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 MRGPRX2Q96LB1 330 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF558Q96NG5 402 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 KIFC1Q9BW19 673 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 SLC25A51Q9H1U9 297 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 MKS1Q9NXB0 559 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 TRPM5Q9NZQ8 1165 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 FNIP2Q9P278 1114 aa14.27□□□□□ -0.13
LIMD1-202ENST00000440097 FNDC1Q4ZHG4 1894 aaPredicted RBP14.27□□□□□ -0.13
LIMD1-202ENST00000440097 NYNRINQ9P2P1 1898 aaKnown RBP14.27□□□□□ -0.13
LIMD1-202ENST00000440097 PLXNA3P51805 1871 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms