RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	NOP9	Q86U38	636 aa	Known RBP	16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	HID1	Q8IV36	788 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	EXTL1	Q92935	676 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	SGF29	Q96ES7	293 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	GFM1	Q96RP9	751 aa	Known RBP	16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	CPEB1	Q9BZB8	566 aa	Known RBP	16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	KLC2	Q9H0B6	622 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	MAGEH1	Q9H213	219 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	RETREG1	Q9H6L5	497 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	NOL6	Q9H6R4	1146 aa	Known RBP	16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	CHMP5	Q9NZZ3	219 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	DKK3	Q9UBP4	350 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	IL17B	Q9UHF5	180 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	COQ6	Q9Y2Z9	468 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	MFHAS1	Q9Y4C4	1052 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	FHOD1	Q9Y613	1164 aa		16.41	■□□□□ 0.22
LAMB1-205	ENST00000439976	NVL	O15381	856 aa	Known RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	KDELR3	O43731	214 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	TMCC1	O94876	653 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	GJB6	O95452	261 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	LSM8	O95777	96 aa	Known RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	ITGB2	P05107	769 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	WT1	P19544	449 aa	Predicted RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	PEX5	P50542	639 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	BLK	P51451	505 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	ZFP36L1	Q07352	338 aa	Known RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	C15orf59	Q2T9L4	293 aa	Predicted RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	CCDC14	Q49A88	953 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	TMEM52B	Q4KMG9	183 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	MIIP	Q5JXC2	388 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	RWDD4	Q6NW29	188 aa	Known RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	USP53	Q70EK8	1073 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	JAML	Q86YT9	394 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	SFTPA2	Q8IWL1	248 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	GPR156	Q8NFN8	814 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	CXorf40A	Q8TE69	158 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	CPA5	Q8WXQ8	436 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	C1QTNF7	Q9BXJ2	289 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	NAA15	Q9BXJ9	866 aa	Known RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	TTYH3	Q9C0H2	523 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	PDCL3	Q9H2J4	239 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	LRRN3	Q9H3W5	708 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	METTL5	Q9NRN9	209 aa	Known RBP	16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	GPR34	Q9UPC5	381 aa		16.4	■□□□□ 0.22
LAMB1-205	ENST00000439976	INSIG1	O15503	277 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	RAMP2	O60895	175 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	RASGRP1	O95267	797 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	MME	P08473	750 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	ALPI	P09923	528 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	LIPC	P11150	499 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	ITIH1	P19827	911 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	ETV5	P41161	510 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	MTIF2	P46199	727 aa	Known RBP	16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	SRSF1	Q07955	248 aa	Known RBP eCLIP	16.39	■□□□□ 0.21	9e-7	■■■□□ 16.6
LAMB1-205	ENST00000439976	NFATC4	Q14934	902 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	MAN2A1	Q16706	1144 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	CDO1	Q16878	200 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	NAA35	Q5VZE5	725 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	XKR5	Q6UX68	686 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	TMPRSS9	Q7Z410	1059 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	CCDC185	Q8N715	623 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	GDAP1L1	Q96MZ0	367 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	FAM117A	Q9C073	453 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	STRADB	Q9C0K7	418 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	PISD	Q9UG56	409 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	DOLK	Q9UPQ8	538 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	LOXL2	Q9Y4K0	774 aa		16.39	■□□□□ 0.21
LAMB1-205	ENST00000439976	RELN	P78509	3460 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	C2CD4B	A6NLJ0	364 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	TMX2-CTNND1	H3BSU7	103 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	SUV39H1	O43463	412 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	BUB1	O43683	1085 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	PLEK	P08567	350 aa	Predicted RBP	16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	FAM87A	P0C7U9	286 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	HDAC4	P56524	1084 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	SRP54	P61011	504 aa	Known RBP	16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	RAPGEF1	Q13905	1077 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	LRRC14	Q15048	493 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	KLHDC7A	Q5VTJ3	777 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	ENPP7	Q6UWV6	458 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	RD3	Q7Z3Z2	195 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	DTX1	Q86Y01	620 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	GPT2	Q8TD30	523 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	EPS8L1	Q8TE68	723 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	RXFP2	Q8WXD0	754 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	SCG3	Q8WXD2	468 aa	Known RBP	16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	CENPI	Q92674	756 aa	Predicted RBP	16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	TBC1D31	Q96DN5	1066 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	PDXP	Q96GD0	296 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	TMEM74	Q96NL1	305 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	RBM15	Q96T37	977 aa	Known RBP eCLIP	16.38	■□□□□ 0.21	2e-6	■■□□□ 12.3
LAMB1-205	ENST00000439976	APOO	Q9BUR5	198 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	NDST4	Q9H3R1	872 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	WDR70	Q9NW82	654 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	FOXJ2	Q9P0K8	574 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	KIAA1468	Q9P260	1216 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	LHX3	Q9UBR4	397 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	APPL1	Q9UKG1	709 aa		16.38	■□□□□ 0.21
LAMB1-205	ENST00000439976	HPCAL4	Q9UM19	191 aa		16.38	■□□□□ 0.21

Retrieved 100 of 20,778 RNA–protein pairs in 191.8 ms