RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 KLHL8Q9P2G9 620 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 IGSF9Q9P2J2 1179 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 UBA2Q9UBT2 640 aaPredicted RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 FAM153AQ9UHL3 310 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 RSPH14Q9UHP6 348 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 ANAPC5Q9UJX4 755 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 GGA2Q9UJY4 613 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 HCN2Q9UL51 889 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 HPCAL4Q9UM19 191 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 NFU1Q9UMS0 254 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 SLC27A6Q9Y2P4 619 aa7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 MTCL1Q9Y4B5 1905 aaKnown RBP7.14□□□□□ -1.27
LSM3P3-201ENST00000436601 CEP290O15078 2479 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF638Q14966 1978 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 OBSL1O75147 1896 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 CXorf51AA0A1B0GTR3 108 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 PRRT4C9JH25 899 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 SMAD6O43541 496 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 GJB3O75712 270 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 TMEM63AO94886 807 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 MMP2P08253 660 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 IL9P15248 144 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 H2AFXP16104 143 aaPredicted RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 MCM3P25205 808 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 PSMB4P28070 264 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 GJA4P35212 333 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 RGRP47804 291 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 DGKGP49619 791 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 MAXP61244 160 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 BASP1P80723 227 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 DSC2Q02487 901 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 CALCOCO2Q13137 446 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 DMC1Q14565 340 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 MORF4L2Q15014 288 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 SPRED3Q2MJR0 410 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ITPRIPL2Q3MIP1 535 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 INO80DQ53TQ3 878 aaPredicted RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 SYCP2LQ5T4T6 812 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 MBLAC2Q68D91 279 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 KCTD11Q693B1 232 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ITPRIPL1Q6GPH6 555 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 RETSATQ6NUM9 610 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 PCGF5Q86SE9 256 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 PRPF39Q86UA1 669 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 SFTPA1Q8IWL2 248 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 TRIM42Q8IWZ5 723 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 KLHDC8BQ8IXV7 354 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 PPIL6Q8IXY8 311 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 AHI1Q8N157 1196 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF557Q8N988 423 aaPredicted RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 GOLM1Q8NBJ4 401 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 SPATA22Q8NHS9 363 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 AENQ8WTP8 325 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 NSMCE1Q8WV22 266 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 SORCS1Q8WY21 1168 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 PRCCQ92733 491 aaPredicted RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ACDQ96AP0 544 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 TADA1Q96BN2 335 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF837Q96EG3 531 aaPredicted RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 IMP4Q96G21 291 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 OXNAD1Q96HP4 312 aaPredicted RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 MRGPRX3Q96LB0 322 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 NSMCE3Q96MG7 304 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 PSKH2Q96QS6 385 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 XPO6Q96QU8 1125 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 FCRL5Q96RD9 977 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 MGME1Q9BQP7 344 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 BRD9Q9H8M2 597 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 FBRSL1Q9HCM7 1045 aaKnown RBP7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 NT5MQ9NPB1 228 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 DEC1Q9P2X7 70 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 LHX3Q9UBR4 397 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 LAMA3Q16787 3333 aa7.13□□□□□ -1.27
LSM3P3-201ENST00000436601 ANAPC1Q9H1A4 1944 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ANTXRLA6NF34 631 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 METTL12A8MUP2 240 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 LOC730098B7Z3J9 87 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 GOLGA8MH3BSY2 632 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ZNF821O75541 412 aaPredicted RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 TMCC1O94876 653 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 MT-CYBP00156 380 aaPredicted RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 GHRHP01286 108 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ASGR2P07307 311 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 APRTP07741 180 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SRCP12931 536 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 CR2P20023 1033 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 TPSB2P20231 275 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 FDFT1P37268 417 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 GRIA1P42261 906 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 STK19P49842 368 aaPredicted RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SERPINH1P50454 418 aaKnown RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 GEMIN4P57678 1058 aaKnown RBP7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ECT2LQ008S8 904 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 CAV1Q03135 178 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 KDSRQ06136 332 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SLC20A2Q08357 652 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 ITKQ08881 620 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 SPARCL1Q14515 664 aa7.12□□□□□ -1.27
LSM3P3-201ENST00000436601 HLTFQ14527 1009 aaKnown RBP eCLIP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms