RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 PPARGP37231 505 aaPredicted RBP10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 GRIA2P42262 883 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 CD151P48509 253 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 CACNB2Q08289 660 aaPredicted RBP10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 CSHL1Q14406 222 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 GRAMD1BQ3KR37 738 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 RANBP10Q6VN20 620 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 KYQ8NBH2 561 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 NAT14Q8WUY8 206 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 SREK1Q8WXA9 508 aaKnown RBP10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 IRGQQ8WZA9 623 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 GCNAQ96QF7 691 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 NOL6Q9H6R4 1146 aaKnown RBP10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 ZDHHC7Q9NXF8 308 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 STK39Q9UEW8 545 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 COL4A4P53420 1690 aaPredicted RBP10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 DYTNA2CJ06 578 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 ASLP04424 464 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 ATP6V1B1P15313 513 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 HDCP19113 662 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 TCN1P20061 433 aaPredicted RBP10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 LSAMPQ13449 338 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 ZNF423Q2M1K9 1284 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 PIGGQ5H8A4 983 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 TFAP2DQ7Z6R9 452 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 RDH11Q8TC12 318 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 TSNARE1Q96NA8 513 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 KLHL5Q96PQ7 755 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 FSD1LQ9BXM9 530 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 POMKQ9H5K3 350 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 FBXO5Q9UKT4 447 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 PADI3Q9ULW8 664 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 DOLKQ9UPQ8 538 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 GIT1Q9Y2X7 761 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 HS3ST4Q9Y661 456 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 LAMA3Q16787 3333 aa10.5□□□□□ -0.73
CLSTN1-203ENST00000435891 H2AFYO75367 372 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 GJB3O75712 270 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 APOA4P06727 396 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 VCLP18206 1134 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 SATL1Q86VE3 508 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 C2CD4AQ8NCU7 369 aaPredicted RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 PPHLN1Q8NEY8 458 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 ZBTB26Q9HCK0 441 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 IGSF5Q9NSI5 407 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 CDYLQ9Y232 598 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 A0A0J9YVX5 310 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 TCAF2A6NFQ2 919 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 J3KR12 359 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 SDHDO14521 159 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 TNFRSF10BO14763 440 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 UQCRBP14927 111 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 CTGFP29279 349 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 HADHAP40939 763 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 PPP1R3AQ16821 1122 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 BTBD8Q5XKL5 378 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 OVOS1Q6IE37 1185 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 ACAD11Q709F0 780 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 LILRA2Q8N149 483 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 HMGCLL1Q8TB92 370 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 AK5Q9Y6K8 562 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 FNDC1Q4ZHG4 1894 aaPredicted RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 A0A1W2PQH9 124 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 E9PAM4 449 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 ANXA9O76027 345 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 PEX11BO96011 259 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 HOXC13P31276 330 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 CCR1P32246 355 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 RPL9P32969 192 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 GRIK1P39086 918 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 GPR15P49685 360 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 WNT3AP56704 352 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 GK5Q6ZS86 529 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 CPSF7Q8N684 471 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 RP9Q8TA86 221 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 PIP4K2CQ8TBX8 421 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 ANKRD49Q8WVL7 239 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 RSPH1Q8WYR4 309 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 LZICQ8WZA0 190 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 ERLEC1Q96DZ1 483 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 TMA16Q96EY4 203 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 HAPLN3Q96S86 360 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 CORO1BQ9BR76 489 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 MRPL46Q9H2W6 279 aaKnown RBP10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 NSMCE4AQ9NXX6 385 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 GTSE1Q9NYZ3 720 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 MID2Q9UJV3 735 aa10.49□□□□□ -0.73
CLSTN1-203ENST00000435891 CASQ2O14958 399 aaPredicted RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 MT-CO1P00395 513 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 HAPLN1P10915 354 aaPredicted RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 CPB1P15086 417 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 TSPAN8P19075 237 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 ALDH1A3P47895 512 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 ZNF135P52742 658 aaPredicted RBP10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 C1QTNF8P60827 252 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 MED21Q13503 144 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 PIK3R6Q5UE93 754 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 IL31Q6EBC2 164 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 NEPROQ6NW34 567 aa10.48□□□□□ -0.73
CLSTN1-203ENST00000435891 BNC2Q6ZN30 1099 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms