RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 PCDHB9Q9Y5E1 797 aa16.68■□□□□ 0.26
CTDSPL-204ENST00000435525 TSPAN11A1L157 253 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 TTC24A2A3L6 582 aaPredicted RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 UPK3BL1B0FP48 263 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 UPK3BL2E5RIL1 263 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 HTRA2O43464 458 aaPredicted RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 PGLSO95336 258 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 EPOP01588 193 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 CYP2A6P11509 494 aaPredicted RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 CD6P30203 668 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 CD68P34810 354 aaPredicted RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 PXNP49023 591 aaPredicted RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 FNTBP49356 437 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 WNT3AP56704 352 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 SARNPP82979 210 aaKnown RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 CNTN1Q12860 1018 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 PCSK7Q16549 785 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 TTC27Q6P3X3 843 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 TSSK4Q6SA08 328 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 LINC00523Q86TU6 105 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 PRPF39Q86UA1 669 aaKnown RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 IPMKQ8NFU5 416 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 OR14C36Q8NHC7 312 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 SLCO2A1Q92959 643 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 RMDN1Q96DB5 314 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 ZNF419Q96HQ0 510 aaPredicted RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 FEM1CQ96JP0 617 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 TDRD1Q9BXT4 1180 aaKnown RBP16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 ASIC3Q9UHC3 531 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 CYP8B1Q9UNU6 501 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 CHD5Q8TDI0 1954 aa16.67■□□□□ 0.26
CTDSPL-204ENST00000435525 MUC22E2RYF6 1773 aaPredicted RBP16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 FAM187AA6NFU0 413 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 F5H423 210 aaPredicted RBP16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 AP3B1O00203 1094 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 NDST3O95803 873 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 MT-CYBP00156 380 aaPredicted RBP16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 IGLV3-19P01714 112 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 SP9P0CG40 484 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 ADRB3P13945 408 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 HLA-DPA1P20036 260 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 RPL22P35268 128 aaKnown RBP16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 ADCY8P40145 1251 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 P2RY2P41231 377 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 BASP1P80723 227 aaKnown RBP16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 TRAF2Q12933 501 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 GPS1Q13098 491 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 UGP2Q16851 508 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 NAPEPLDQ6IQ20 393 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 PARS2Q7L3T8 475 aaKnown RBP16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 FAM124AQ86V42 546 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 AADATQ8N5Z0 425 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 LPCAT1Q8NF37 534 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 SPOCK2Q92563 424 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 NUP205Q92621 2012 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 ARRDC3Q96B67 414 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 ECHDC3Q96DC8 303 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 NEUROG2Q9H2A3 272 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 UBP1Q9NZI7 540 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 NYNRINQ9P2P1 1898 aaKnown RBP16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 CHKBQ9Y259 395 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 PCDHGA2Q9Y5H1 932 aa16.66■□□□□ 0.26
CTDSPL-204ENST00000435525 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 TRAFD1O14545 582 aaPredicted RBP16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 TSPAN6O43657 245 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 AP1G1O43747 822 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 MMP2P08253 660 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 GRIA4P48058 902 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 CDK16Q00536 496 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 C2orf54Q08AI8 447 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 TRIP13Q15645 432 aaPredicted RBP16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 NEK5Q6P3R8 708 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 CEP68Q76N32 757 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 PCGF5Q86SE9 256 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 OR2T34Q8NGX1 318 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 TADA1Q96BN2 335 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 MLPHQ9BV36 600 aaPredicted RBP16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 PCED1AQ9H1Q7 454 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 KCNH6Q9H252 994 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 PREBQ9HCU5 417 aa16.65■□□□□ 0.26
CTDSPL-204ENST00000435525 TBC1D3DA0A087WVF3 549 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TBC1D3IA0A087WXS9 549 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TBC1D3EA0A087X179 549 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TBC1D3KA0A087X1G2 549 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TBC1D3FA6NER0 549 aaPredicted RBP16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TBC1D3LB9A6J9 549 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 GJB3O75712 270 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 RPP40O75818 363 aaKnown RBP16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 PCDH8O95206 1070 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 METTL18O95568 372 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 SEMA4FO95754 770 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 FGF1P05230 155 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 APRTP07741 180 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TBC1D3HP0C7X1 549 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TDGF1P13385 188 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 ETS1P14921 441 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 TIMP2P16035 220 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 DRD3P35462 400 aa16.64■□□□□ 0.25
CTDSPL-204ENST00000435525 VPS41P49754 854 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms