RNA–Protein interactions for RNA: ENST00000429836.5

SEMA4D-209, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-209ENST00000429836 GOT1P17174 413 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 IL10P22301 178 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 SHMT2P34897 504 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 NEK2P51955 445 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 OCA2Q04671 838 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 CAPSQ13938 189 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 USP10Q14694 798 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 POLD3Q15054 466 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 CCNYL2Q5T2Q4 361 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 CERCAMQ5T4B2 595 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 TBPL2Q6SJ96 375 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 FRA10AC1Q70Z53 315 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 NT5DC4Q86YG4 428 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 TP53INP2Q8IXH6 220 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 C12orf29Q8N999 325 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 ANKRD52Q8NB46 1076 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 CCNYQ8ND76 341 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 P2RY11Q96G91 374 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 CENPNQ96H22 339 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 TMEM176AQ96HP8 235 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 SLC45A3Q96JT2 553 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 MAELQ96JY0 434 aaKnown RBP11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 CSPG4P5Q96PW8 444 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 KCTD15Q96SI1 283 aaPredicted RBP11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 ADNPQ9H2P0 1102 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 ATP13A3Q9H7F0 1226 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 CYP4F12Q9HCS2 524 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 TRPV5Q9NQA5 729 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 ANKMY1Q9P2S6 941 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 TIMM22Q9Y584 194 aa11.17□□□□□ -0.62
SEMA4D-209ENST00000429836 BPTFQ12830 3046 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 LTBP1Q14766 1721 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 ZCWPW2A0A1B0GU75 182 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 EIF3FO00303 357 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 MFSD11O43934 449 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 GPC4O75487 556 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 KCNA2P16389 499 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TPH1P17752 444 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 RPS9P46781 194 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 MPP1Q00013 466 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 MAPRE1Q15691 268 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 HSDL1Q3SXM5 330 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 OTUD3Q5T2D3 398 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 GTF2IRD2BQ6EKJ0 949 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 STYK1Q6J9G0 422 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 CRTC3Q6UUV7 619 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 GTF2IRD2Q86UP8 949 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 SLC41A1Q8IVJ1 513 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TMEM192Q8IY95 271 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 ANKRD13AQ8IZ07 590 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 DNAAF3Q8N9W5 541 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TSNARE1Q96NA8 513 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TUBA1CQ9BQE3 449 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 SNX25Q9H3E2 840 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 GPN2Q9H9Y4 310 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TBC1D13Q9NVG8 400 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 RAD54BQ9Y620 910 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 A0A1W2PQ67 120 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TRPC5OSA6NMA1 111 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 KCNK1O00180 336 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 MAN1A2O60476 641 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 RSL1D1O76021 490 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TNNC2P02585 160 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 IL7RP16871 459 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 CHRM3P20309 590 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 PSMA4P25789 261 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 MZF1P28698 734 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 ALDH4A1P30038 563 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 AXLP30530 894 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 AP3M2P53677 418 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 SQLEQ14534 574 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 SPRED1Q7Z699 444 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 SLC22A16Q86VW1 577 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 KCNMB4Q86W47 210 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 IFNEQ86WN2 208 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 ADGRG5Q8IZF4 528 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 CENPLQ8N0S6 344 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 CCDC185Q8N715 623 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 TXNDC5Q8NBS9 432 aaKnown RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 PDPRQ8NCN5 879 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 CXorf38Q8TB03 319 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 STYXQ8WUJ0 223 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 NXNL1Q96CM4 212 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 NAT9Q9BTE0 207 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 FUNDC2Q9BWH2 189 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 FTHL17Q9BXU8 183 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 JPH1Q9HDC5 661 aaPredicted RBP11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 HMG20AQ9NP66 347 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 LTB4R2Q9NPC1 389 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 CD320Q9NPF0 282 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 MTRRQ9UBK8 725 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 SIX4Q9UIU6 781 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 BTAF1O14981 1849 aa11.16□□□□□ -0.62
SEMA4D-209ENST00000429836 ZFC3H1O60293 1989 aaKnown RBP11.15□□□□□ -0.62
SEMA4D-209ENST00000429836 INPP4BO15327 924 aa11.15□□□□□ -0.62
SEMA4D-209ENST00000429836 SLC35E2BP0CK96 405 aa11.15□□□□□ -0.62
SEMA4D-209ENST00000429836 NCK1P16333 377 aa11.15□□□□□ -0.62
SEMA4D-209ENST00000429836 TSPAN8P19075 237 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms