RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 SGPL1O95470 568 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 HOXB1P14653 301 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 PSMA1P25786 263 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 RPL14P50914 215 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 PTF1AQ7RTS3 328 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 NOP9Q86U38 636 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 CITED4Q96RK1 184 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 FOCADQ5VW36 1801 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 EME2A4GXA9 379 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 NUDT19A8MXV4 375 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 MED24O75448 989 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 IFNA4P05014 189 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 UGT2B4P06133 528 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 BRCC3P46736 316 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 SWI5Q1ZZU3 235 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 TBCELQ5QJ74 424 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 SLITRK4Q8IW52 837 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 WRNIP1Q96S55 665 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 ANKMY1Q9P2S6 941 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 SEC24DO94855 1032 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 ALOX12P18054 663 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 CASP7P55210 303 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 FASTKD1Q53R41 847 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 PDPK2PQ6A1A2 396 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 ERICH5Q6P6B1 374 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 FGD2Q7Z6J4 655 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC39A13Q96H72 371 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 CPXM1Q96SM3 734 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 TOP3BO95985 862 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 S100A2P29034 98 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 PPM1FP49593 454 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 OR2B6P58173 313 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 NSUN2Q08J23 767 aaKnown RBP eCLIP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 NFX1Q12986 1120 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 PIK3R6Q5UE93 754 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 LSMEM2Q8N112 164 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 FAM71DQ8N9W8 422 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 JPH3Q8WXH2 748 aaPredicted RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 EXT2Q93063 718 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 UNC93B1Q9H1C4 597 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 DHX35Q9H5Z1 703 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 NT5DC2Q9H857 520 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 PCDHGB4Q9UN71 923 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 GNEQ9Y223 722 aaKnown RBP7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 PCDHA10Q9Y5I2 948 aa7.58□□□□□ -1.2
SYNPO2-202ENST00000429713 RCCD1A6NED2 376 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 UBDO15205 165 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 LYPLA2O95372 231 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 RAB3AP20336 220 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 AQP4P55087 323 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 SMAD1Q15797 465 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NEDD8Q15843 81 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 HACD4Q5VWC8 232 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 UGT3A1Q6NUS8 523 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 KRT77Q7Z794 578 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ANKFN1Q8N957 763 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CPNE1Q99829 537 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PCDH12Q9NPG4 1184 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 AASSQ9UDR5 926 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 BCORQ6W2J9 1755 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 KBTBD13C9JR72 458 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 NEMP1O14524 444 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 HLA-DRAP01903 254 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 GABRB2P47870 512 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 LMBRD2Q68DH5 695 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CORO6Q6QEF8 472 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 C10orf82Q8WW14 230 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 SPOCK3Q9BQ16 436 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PCDHGC3Q9UN70 934 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 KRT87PA6NCN2 255 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 OR14I1A6ND48 311 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PROCP04070 461 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CDC25CP30307 473 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PTPN7P35236 360 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 SYT16Q17RD7 645 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 HES5Q5TA89 166 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 IQSEC1Q6DN90 963 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 BPHLQ86WA6 291 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 HIPK1Q86Z02 1210 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CLEC10AQ8IUN9 316 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 TMEM199Q8N511 208 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 OR6B3Q8NGW1 331 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 C7orf43Q8WVR3 580 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 CYB5R1Q9UHQ9 305 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 TRAF6Q9Y4K3 522 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 PIGBOS1A0A0B4J2F0 54 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ANKDD1BA6NHY2 528 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 OR6C65A6NJZ3 312 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 RGS10O43665 173 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 GATCO43716 136 aaKnown RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ERBB2P04626 1255 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 FLI1Q01543 452 aaPredicted RBP7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 MOGSQ13724 837 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 EFHC2Q5JST6 749 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ELP2Q6IA86 826 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 ATG14Q6ZNE5 492 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 GPR180Q86V85 440 aa7.57□□□□□ -1.2
SYNPO2-202ENST00000429713 SLC44A2Q8IWA5 706 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms