RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 KLHL17Q6TDP4 642 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PROSER1Q86XN7 944 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 SLC41A1Q8IVJ1 513 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 KIAA0319LQ8IZA0 1049 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ITCHQ96J02 903 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 TBCDQ9BTW9 1192 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 RNPEPL1Q9HAU8 725 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 hCG_1818297A0A087WSY0 165 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 AP3D1O14617 1153 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 MTAPQ13126 283 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 AP5B1Q2VPB7 878 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ABRAXAS1Q6UWZ7 409 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 STRADAQ7RTN6 431 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 TTC7BQ86TV6 843 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 RGL4Q8IZJ4 473 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 FBXW8Q8N3Y1 598 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 EFCAB3Q8N7B9 438 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 WDR60Q8WVS4 1066 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 COPS8Q99627 209 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ARMCX1Q9P291 453 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ERGIC3Q9Y282 383 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 OR10H1Q9Y4A9 318 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 DISP2A7MBM2 1401 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 H3BNH8 94 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 HLA-DQA2P01906 255 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 NOMO3P69849 1222 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PFKPQ01813 784 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 LRRC55Q6ZSA7 311 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 SFRP1Q8N474 314 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 OR8D1Q8WZ84 308 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 MPP4Q96JB8 637 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ACE2Q9BYF1 805 aaPredicted RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 LHX5Q9H2C1 402 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PRDM12Q9H4Q4 367 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 INTS7Q9NVH2 962 aaKnown RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 ITGB1BP2Q9UKP3 347 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 UNC5CO95185 931 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 ADH1CP00326 375 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 NR2F1P10589 423 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 TGFBR2P37173 567 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 GRIA4P48058 902 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 CAPSQ13938 189 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 CCDC185Q8N715 623 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PTCD2Q8WV60 388 aaKnown RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 LRRIQ1Q96JM4 1722 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 DUSP16Q9BY84 665 aa12.87□□□□□ -0.35
LDB3-205ENST00000429277 PIH1D1Q9NWS0 290 aaKnown RBP12.87□□□□□ -0.35
LDB3-205ENST00000429277 FSCN2O14926 492 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 CBX6O95503 412 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 ADRB2P07550 413 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 SERPINA6P08185 405 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 PRG2P13727 222 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 XIAPP98170 497 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 CRELD2Q6UXH1 353 aaPredicted RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 FBXO30Q8TB52 745 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 PHF10Q8WUB8 498 aaKnown RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 AP3S1Q92572 193 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 FBXO6Q9NRD1 293 aaPredicted RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 KIAA1522Q9P206 1035 aaPredicted RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 AGO1Q9UL18 857 aaKnown RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 BTBD3Q9Y2F9 522 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 GMPPBQ9Y5P6 360 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 UBE2QL1A1L167 161 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 PLSCR1O15162 318 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 SLC25A12O75746 678 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 ACTR3P61158 418 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 MRPS22P82650 360 aaKnown RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 PSMD5Q16401 504 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 KCNK18Q7Z418 384 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 MBOAT7Q96N66 472 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 VPS35Q96QK1 796 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 PCDHGB3Q9Y5G1 929 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 A0A087X0B3 334 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 CACNB4O00305 520 aaPredicted RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 CAPN1P07384 714 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 COL6A2P12110 1019 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 BEX3Q00994 111 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 AUHQ13825 339 aaKnown RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 AAGABQ6PD74 315 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 FAM92BQ6ZTR7 304 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 CHPFQ8IZ52 775 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 GRIN3AQ8TCU5 1115 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 KIFC1Q9BW19 673 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 TRPS1Q9UHF7 1281 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 FBXO5Q9UKT4 447 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 PCDHB1Q9Y5F3 818 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 TMEM150BA6NC51 233 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 AZIN1O14977 448 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 PRMT3O60678 531 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 TSC22D2O75157 780 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 ITGA2BP08514 1039 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 HNRNPH3P31942 346 aaKnown RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 GPD2P43304 727 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 IDH2P48735 452 aaKnown RBP12.86□□□□□ -0.35
LDB3-205ENST00000429277 CHN2P52757 468 aa12.86□□□□□ -0.35
LDB3-205ENST00000429277 SLC25A24Q6NUK1 477 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms