RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 BCAP31P51572 246 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 APLP1P51693 650 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 TNK2Q07912 1038 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 PPP1R8Q12972 351 aaKnown RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 BTG3Q14201 252 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 ZBED5Q49AG3 693 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 HABP4Q5JVS0 413 aaKnown RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 TSTD2Q5T7W7 516 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 MFSD6LQ8IWD5 586 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 RYBPQ8N488 228 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 RNF139Q8WU17 664 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 TFAP2CQ92754 450 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 HEPHQ9BQS7 1158 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 EIF2AQ9BY44 585 aaKnown RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 SPAG4Q9NPE6 437 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 ERAP1Q9NZ08 941 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 SLC2A6Q9UGQ3 507 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 VPS51Q9UID3 782 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 GJD2Q9UKL4 321 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 SLC27A5Q9Y2P5 690 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 MAGED1Q9Y5V3 778 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 KANSL1LA0AUZ9 987 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 PPP6CO00743 305 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 INPP4BO15327 924 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 SNAP29O95721 258 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 MT-CYBP00156 380 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 MATN1P21941 496 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 ADCYAP1R1P41586 468 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 RBP5P82980 135 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 LAMC2Q13753 1193 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 CLEC14AQ86T13 490 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 LDB1Q86U70 411 aaPredicted RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 SHCBP1Q8NEM2 672 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 SLC35B4Q969S0 331 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 PBXIP1Q96AQ6 731 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 NEURL2Q9BR09 285 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 HIPK3Q9H422 1215 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 CDHR5Q9HBB8 845 aa13.59□□□□□ -0.23
LRCH3-203ENST00000425562 WARS2Q9UGM6 360 aaKnown RBP13.59□□□□□ -0.23
LRCH3-203ENST00000425562 CLDN5O00501 218 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 DLGAP1O14490 977 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 JCHAINP01591 159 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 CDH3P22223 829 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 LSM3P62310 102 aaKnown RBP13.58□□□□□ -0.24
LRCH3-203ENST00000425562 SEPT6Q14141 434 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 SPANXN3Q5MJ09 141 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 ZNF362Q5T0B9 420 aaPredicted RBP13.58□□□□□ -0.24
LRCH3-203ENST00000425562 SYPL2Q5VXT5 272 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 MAMDC4Q6UXC1 1216 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 PRR23BQ6ZRT6 265 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 CROCCP3Q8IVE0 287 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 SIX6OS1Q8N1H7 587 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 BIRC8Q96P09 236 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 ANKRD60Q9BZ19 345 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 UNC93B1Q9H1C4 597 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 TSPAN1O60635 241 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 GSTT2P0CG29 244 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 GSTT2BP0CG30 244 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 PCNAP12004 261 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 ALDH4A1P30038 563 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 BCAT1P54687 386 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 MERTKQ12866 999 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 ZBTB17Q13105 803 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 DPYSQ14117 519 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 MAPK11Q15759 364 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 PLA2G4EQ3MJ16 856 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 NOMO2Q5JPE7 1267 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 RETREG3Q86VR2 466 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 DNAJB14Q8TBM8 379 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 HEXDCQ8WVB3 486 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 KCNN1Q92952 543 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 DGCR6LQ9BY27 220 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 UPF3AQ9H1J1 476 aaKnown RBP13.58□□□□□ -0.24
LRCH3-203ENST00000425562 ADNPQ9H2P0 1102 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 ZNF385DQ9H6B1 395 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 FANCEQ9HB96 536 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 CROTQ9UKG9 612 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 ACOT9Q9Y305 439 aa13.58□□□□□ -0.24
LRCH3-203ENST00000425562 TMEM247A6NEH6 219 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 M0QYT0 321 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 SRP72O76094 671 aaKnown RBP13.57□□□□□ -0.24
LRCH3-203ENST00000425562 BDNFP23560 247 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 IGFBP6P24592 240 aaPredicted RBP13.57□□□□□ -0.24
LRCH3-203ENST00000425562 SLC7A1P30825 629 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 TMEM214Q6NUQ4 689 aaKnown RBP13.57□□□□□ -0.24
LRCH3-203ENST00000425562 ZC3HC1Q86WB0 502 aaKnown RBP13.57□□□□□ -0.24
LRCH3-203ENST00000425562 SLC15A3Q8IY34 581 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 PDZD8Q8NEN9 1154 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 SPPL2BQ8TCT7 592 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 DQX1Q8TE96 717 aaKnown RBP13.57□□□□□ -0.24
LRCH3-203ENST00000425562 EMID1Q96A84 441 aaPredicted RBP13.57□□□□□ -0.24
LRCH3-203ENST00000425562 VPS50Q96JG6 964 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 EFHD1Q9BUP0 239 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 MLPHQ9BV36 600 aaPredicted RBP13.57□□□□□ -0.24
LRCH3-203ENST00000425562 POLE4Q9NR33 117 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 FADS3Q9Y5Q0 445 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 CBFA2T3O75081 653 aa13.57□□□□□ -0.24
LRCH3-203ENST00000425562 MPOP05164 745 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms