RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 IFNKQ9P0W0 207 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 DKK4Q9UBT3 224 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 ASXL3Q9C0F0 2248 aa18.65■□□□□ 0.58
NUP50-207ENST00000424634 LY6G6EA0A0G2JKS1 128 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 SCAMP1O15126 338 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 MUSKO15146 869 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 PALMO75781 387 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 GYPCP04921 128 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 NME1P15531 152 aaKnown RBP18.64■□□□□ 0.57
NUP50-207ENST00000424634 AMPD1P23109 780 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 CSNK1DP48730 415 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 HNRNPKP61978 463 aaKnown RBP eCLIP18.64■□□□□ 0.57
NUP50-207ENST00000424634 SEMG2Q02383 582 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 TARDBPQ13148 414 aaKnown RBP eCLIP18.64■□□□□ 0.57
NUP50-207ENST00000424634 DPYSL2Q16555 572 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 POLNQ7Z5Q5 900 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 PARGQ86W56 976 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 ZNF641Q96N77 438 aaPredicted RBP18.64■□□□□ 0.57
NUP50-207ENST00000424634 NCAPGQ9BPX3 1015 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 PCDH12Q9NPG4 1184 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 IPO11Q9UI26 975 aaKnown RBP18.64■□□□□ 0.57
NUP50-207ENST00000424634 COQ6Q9Y2Z9 468 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 U3KQA8 63 aa18.64■□□□□ 0.57
NUP50-207ENST00000424634 GOLGA6L19H0YKK7 550 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 K7ESM1 405 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 RIOK3O14730 519 aaKnown RBP18.63■□□□□ 0.57
NUP50-207ENST00000424634 PRKCGP05129 697 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 RARAP10276 462 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 SUOXP51687 545 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 ZNF135P52742 658 aaPredicted RBP18.63■□□□□ 0.57
NUP50-207ENST00000424634 INSM1Q01101 510 aaPredicted RBP18.63■□□□□ 0.57
NUP50-207ENST00000424634 IL10RBQ08334 325 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 GRM3Q14832 879 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 ZSCAN23Q3MJ62 389 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 BOLA3Q53S33 107 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 ZNF548Q8NEK5 533 aaPredicted RBP18.63■□□□□ 0.57
NUP50-207ENST00000424634 RFFLQ8WZ73 363 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 HSPH1Q92598 858 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 APOLD1Q96LR9 279 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 TCEAL2Q9H3H9 227 aaPredicted RBP18.63■□□□□ 0.57
NUP50-207ENST00000424634 ZWILCHQ9H900 591 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 NLGN3Q9NZ94 848 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 RAXQ9Y2V3 346 aa18.63■□□□□ 0.57
NUP50-207ENST00000424634 LUC7L2Q9Y383 392 aaKnown RBP18.63■□□□□ 0.57
NUP50-207ENST00000424634 ADAMTS20P59510 1910 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 NEMP2A6NFY4 417 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 CYP1A2P05177 515 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 CKMT1AP12532 417 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 JUNDP17535 347 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 XPAP23025 273 aaPredicted RBP18.62■□□□□ 0.57
NUP50-207ENST00000424634 DAB2P98082 770 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 NSUN2Q08J23 767 aaKnown RBP eCLIP18.62■□□□□ 0.57
NUP50-207ENST00000424634 SLC10A7Q0GE19 358 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 PIGHQ14442 188 aaPredicted RBP18.62■□□□□ 0.57
NUP50-207ENST00000424634 NFKBIBQ15653 356 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 WSCD2Q2TBF2 565 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 NIPA2Q8N8Q9 360 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 FAM181AQ8N9Y4 354 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 CSPG4P5Q96PW8 444 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 TUBGCP5Q96RT8 1024 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 NUP85Q9BW27 656 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 SP110Q9HB58 689 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.62■□□□□ 0.57
NUP50-207ENST00000424634 NENFQ9UMX5 172 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 GPSM3Q9Y4H4 160 aa18.62■□□□□ 0.57
NUP50-207ENST00000424634 SHROOM3Q8TF72 1996 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 TTC24A2A3L6 582 aaPredicted RBP18.61■□□□□ 0.57
NUP50-207ENST00000424634 H3BRJ5 948 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 GCATO75600 419 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 PEX11BO96011 259 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 C6P13671 934 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 CASP14P31944 242 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 HNF1BP35680 557 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 EIF4A3P38919 411 aaKnown RBP18.61■□□□□ 0.57
NUP50-207ENST00000424634 LIG3P49916 1009 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 YPEL5P62699 121 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 SLC25A11Q02978 314 aaKnown RBP18.61■□□□□ 0.57
NUP50-207ENST00000424634 ELP6Q0PNE2 266 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 RFTN1Q14699 578 aaPredicted RBP18.61■□□□□ 0.57
NUP50-207ENST00000424634 IRF4Q15306 451 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 ALKBH5Q6P6C2 394 aaKnown RBP18.61■□□□□ 0.57
NUP50-207ENST00000424634 BRAT1Q6PJG6 821 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 RBFAQ8N0V3 343 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 LZTR1Q8N653 840 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 ECHDC3Q96DC8 303 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 CINPQ9BW66 212 aaPredicted RBP18.61■□□□□ 0.57
NUP50-207ENST00000424634 XPO4Q9C0E2 1151 aaKnown RBP18.61■□□□□ 0.57
NUP50-207ENST00000424634 PCDH18Q9HCL0 1135 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 ANAPC7Q9UJX3 599 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 CSNK1G3Q9Y6M4 447 aa18.61■□□□□ 0.57
NUP50-207ENST00000424634 TRAFD1O14545 582 aaPredicted RBP18.6■□□□□ 0.57
NUP50-207ENST00000424634 AQP9O43315 295 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 ALPPL2P10696 532 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 IL4RP24394 825 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 MMP12P39900 470 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 ARL4AP40617 200 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 SCNN1BP51168 640 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 THOP1P52888 689 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 E2F1Q01094 437 aa18.6■□□□□ 0.57
NUP50-207ENST00000424634 PTK2BQ14289 1009 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms