RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 GUCY1A3Q02108 690 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 NME3Q13232 169 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ENPP2Q13822 863 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF234Q14588 700 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 STARD3Q14849 445 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ZSCAN23Q3MJ62 389 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 USP39Q53GS9 565 aaKnown RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 PMS2CLQ68D20 193 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 TRNP1Q6NT89 227 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 TRIM72Q6ZMU5 477 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 MMS22LQ6ZRQ5 1243 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 CHST9Q7L1S5 443 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 MTDHQ86UE4 582 aaKnown RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ADIPOR2Q86V24 386 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 LUZP1Q86V48 1076 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 C11orf74Q86VG3 221 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 CHSY1Q86X52 802 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 JAMLQ86YT9 394 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 LGI2Q8N0V4 545 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 CFAP52Q8N1V2 620 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ATP6V0D2Q8N8Y2 350 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF557Q8N988 423 aaPredicted RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 UCMAQ8WVF2 138 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 RLN3Q8WXF3 142 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ERLEC1Q96DZ1 483 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ZC3H10Q96K80 434 aaKnown RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 LMLNQ96KR4 655 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 BTN2A3PQ96KV6 586 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 JMJD8Q96S16 334 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 PCDHB18PQ96TA0 734 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 NPY6RQ99463 290 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 PRMT1Q99873 361 aaKnown RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ZFYVE21Q9BQ24 234 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 C11orf70Q9BRQ4 267 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 PIGVQ9NUD9 493 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 PCMTD2Q9NV79 361 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 ELOVL2Q9NXB9 296 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 RRN3Q9NYV6 651 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 STAP1Q9ULZ2 295 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 USP18Q9UMW8 372 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 INVSQ9Y283 1065 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 TNPO3Q9Y5L0 923 aaKnown RBP7.13□□□□□ -1.27
HMGN1-205ENST00000419378 CKAP5Q14008 2032 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 PLXND1Q9Y4D7 1925 aa7.13□□□□□ -1.27
HMGN1-205ENST00000419378 A0A1W2PQC6 194 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 TCRBV16S1A1N1A0A5B0 115 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 TIMM44O43615 452 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 LRP3O75074 770 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 RHOBTB1O94844 696 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 FERP16591 822 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 ABCB4P21439 1286 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 NSFP46459 744 aaKnown RBP7.12□□□□□ -1.27
HMGN1-205ENST00000419378 CXCR3P49682 368 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 TPM4P67936 248 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 LMAN2Q12907 356 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 PTP4A2Q12974 167 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 CDH18Q13634 790 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 ZNF460Q14592 562 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 E2F5Q15329 346 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 ELF2Q15723 593 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 SLC25A52Q3SY17 297 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 FUT11Q495W5 492 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 FILIP1LQ4L180 1135 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 FSCBQ5H9T9 825 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 RABGAP1LQ5R372 815 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 SLC23A3Q6PIS1 610 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 SERPINA13PQ6UXR4 307 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 BNIPLQ7Z465 357 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 PHF13Q86YI8 300 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-205ENST00000419378 CARNMT1Q8N4J0 409 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 FRMD1Q8N878 549 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 SLC30A5Q8TAD4 765 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 FIBINQ8TAL6 211 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.12□□□□□ -1.27
HMGN1-205ENST00000419378 NT5C3BQ969T7 300 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 PGAP3Q96FM1 320 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-205ENST00000419378 LOXL4Q96JB6 756 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 MRGPRX1Q96LB2 322 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 CFAP57Q96MR6 1250 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 TBCBQ99426 244 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 AGPAT1Q99943 283 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 TKTL2Q9H0I9 626 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 SLC6A17Q9H1V8 727 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 ARRDC1-AS1Q9H2J1 176 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 TMEM245Q9H330 911 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 ANLNQ9NQW6 1124 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 SLC12A6Q9UHW9 1150 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 MBD1Q9UIS9 605 aaPredicted RBP7.12□□□□□ -1.27
HMGN1-205ENST00000419378 FBXL7Q9UJT9 491 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 INTS6Q9UL03 887 aaKnown RBP7.12□□□□□ -1.27
HMGN1-205ENST00000419378 ABCA7Q8IZY2 2146 aa7.12□□□□□ -1.27
HMGN1-205ENST00000419378 CACNA1AO00555 2505 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 A0A1B0GVM2 712 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 TCAF2A6NFQ2 919 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 LRRC53A6NM62 1247 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 H0Y626 953 aa7.11□□□□□ -1.27
HMGN1-205ENST00000419378 I6L893 689 aaPredicted RBP7.11□□□□□ -1.27
HMGN1-205ENST00000419378 OPA1O60313 960 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms