RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 ANXA9O76027 345 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 CPP00450 1065 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 NUDT17P0C025 328 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 ETFBP38117 255 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 OPRD1P41143 372 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 ELK3P41970 407 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 MMP13P45452 471 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 DHPSP49366 369 aaPredicted RBP13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 NUMBP49757 651 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 SGSHP51688 502 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 OXCT1P55809 520 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 IRX4P78413 519 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 SPARCL1Q14515 664 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 FASTKD3Q14CZ7 662 aaKnown RBP13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 UAP1L1Q3KQV9 507 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 MSS51Q4VC12 460 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 CCDC38Q502W7 563 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 MPPE1Q53F39 396 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 RNF219Q5W0B1 726 aaPredicted RBP13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 SETD3Q86TU7 594 aaPredicted RBP13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 C11orf74Q86VG3 221 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 RASSF3Q86WH2 238 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 BBS7Q8IWZ6 715 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 BBS5Q8N3I7 341 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 FBXO36Q8NEA4 188 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 MDGA1Q8NFP4 955 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 OR7D4Q8NG98 312 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 BHMTQ93088 406 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 CFAP36Q96G28 342 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 SERPINB12Q96P63 405 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 IL12RB2Q99665 862 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 TMEM121BQ9BXQ6 578 aaPredicted RBP13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 FAM53CQ9NYF3 392 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZNF212Q9UDV6 495 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 STOML2Q9UJZ1 356 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 CHMP2BQ9UQN3 213 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 MAD1L1Q9Y6D9 718 aa13.34□□□□□ -0.27
HLA-DMB-258ENST00000418107 A0A0D9SEW6 157 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 E2F8A0AVK6 867 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 E7ESA3 106 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 H3BQF6 201 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 POLR3GO15318 223 aaPredicted RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 NFATC1O95644 943 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 SHBGP04278 402 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 IVLP07476 585 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 CEACAM1P13688 526 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 HOXB3P14651 431 aaPredicted RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 CSRP1P21291 193 aaKnown RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 CD68P34810 354 aaPredicted RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 GEMP55040 296 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 SESN2P58004 480 aaPredicted RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZXDBP98169 803 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZNF844Q08AG5 666 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 CDH18Q13634 790 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 HNRNPDQ14103 355 aaKnown RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 ZNF235Q14590 738 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 GAB4Q2WGN9 574 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 CASC4Q6P4E1 433 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 LEKR1Q6ZMV7 388 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 TPGS1Q6ZTW0 290 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 MFN1Q8IWA4 741 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 DNAAF3Q8N9W5 541 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 DEFB124Q8NES8 71 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 MAML1Q92585 1016 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 PIGKQ92643 395 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 EPB41L4BQ9H329 900 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 LRRC40Q9H9A6 602 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 ATP13A1Q9HD20 1204 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 UBP1Q9NZI7 540 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 MMP17Q9ULZ9 603 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 AAR2Q9Y312 384 aaKnown RBP13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 NFS1Q9Y697 457 aa13.33□□□□□ -0.27
HLA-DMB-258ENST00000418107 THADAQ6YHU6 1953 aa13.33□□□□□ -0.28
HLA-DMB-258ENST00000418107 AKAP13Q12802 2813 aa13.33□□□□□ -0.28
HLA-DMB-258ENST00000418107 CBX4O00257 560 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 RASGRF2O14827 1237 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 PRAMEF11O60813 436 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 LUC7L3O95232 432 aaKnown RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 AP2A1O95782 977 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SYF2O95926 243 aaKnown RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 HLA-DQB2P05538 268 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 ABHD2P08910 425 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 MLNP12872 115 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 HNRNPLP14866 589 aaKnown RBP eCLIP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 TCF3P15923 654 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 COL9A2Q14055 689 aaPredicted RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 LBRQ14739 615 aaKnown RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 STAT4Q14765 748 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 CRY1Q16526 586 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 UBAP2Q5T6F2 1119 aaKnown RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 TMCO4Q5TGY1 634 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 KIAA1211LQ6NV74 962 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 LRRC8BQ6P9F7 803 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 TMEM92Q6UXU6 159 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 C3orf62Q6ZUJ4 267 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 LINC00523Q86TU6 105 aa13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 CAND1Q86VP6 1230 aaKnown RBP13.32□□□□□ -0.28
HLA-DMB-258ENST00000418107 SFTPA1Q8IWL2 248 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms