RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 CCNYQ8ND76 341 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TRPV1Q8NER1 839 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SNIP1Q8TAD8 396 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PIP4K2CQ8TBX8 421 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CALML6Q8TD86 181 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SH3RF2Q8TEC5 729 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ABHD5Q8WTS1 349 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 DNASE1L2Q92874 299 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 EXT2Q93063 718 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 RFKQ969G6 155 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 RAB24Q969Q5 203 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MOAP1Q96BY2 351 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ELP4Q96EB1 424 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ARSGQ96EG1 525 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PGM2Q96G03 612 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TCTN2Q96GX1 697 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MASTLQ96GX5 879 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM71F1Q96KD3 344 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MEGF10Q96KG7 1140 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FAM84AQ96KN4 292 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FANCD2OSQ96PS1 177 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MED15Q96RN5 788 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FOXB1Q99853 325 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF416Q9BWM5 594 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CDK19Q9BWU1 502 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 STRA6Q9BX79 667 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 OSBPL10Q9BXB5 764 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PINK1Q9BXM7 581 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SLC12A9Q9BXP2 914 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MS4A7Q9GZW8 240 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TMEM117Q9H0C3 514 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 IKZF4Q9H2S9 585 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 VCX2Q9H322 139 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KCNF1Q9H3M0 494 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MTG2Q9H4K7 406 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 WDR6Q9NNW5 1121 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 AGPAT3Q9NRZ7 376 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 NUDT15Q9NV35 164 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KLHL28Q9NXS3 571 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 BTG4Q9NY30 223 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TUBA8Q9NY65 449 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SPG21Q9NZD8 308 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 EHD3Q9NZN3 535 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 OR6C2Q9NZP2 312 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KLHL8Q9P2G9 620 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TNFRSF10DQ9UBN6 386 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TRIM10Q9UDY6 481 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 FBXL17Q9UF56 701 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 KCNN3Q9UGI6 736 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 VPS51Q9UID3 782 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TRMT6Q9UJA5 497 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 DBNLQ9UJU6 430 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 AJAP1Q9UKB5 411 aaPredicted RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 GMEB2Q9UKD1 530 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TSPAN16Q9UKR8 245 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 DNPEPQ9ULA0 475 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 WASF3Q9UPY6 502 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SHOC2Q9UQ13 582 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 CDYLQ9Y232 598 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PLEKHA6Q9Y2H5 1048 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 MRPS2Q9Y399 296 aaKnown RBP3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 ADAM18Q9Y3Q7 739 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 PCDHB2Q9Y5E7 798 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 TEX264Q9Y6I9 313 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 SPATA31A3Q5VYP0 1347 aa3.18□□□□□ -1.9
CTDSPL-203ENST00000416688 NPC1L1Q9UHC9 1359 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 A0A0U1RQS6 177 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 IQANK1A0A1B0GTG1 560 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 C13orf42A0A1B0GVH6 325 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 A0A1W2PRG0 241 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ELOVL7A1L3X0 281 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 C7orf72A4D263 438 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SDR42E2A6NKP2 422 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF716A6NP11 495 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KIF28PB7ZC32 967 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SOCS6O14544 535 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 SMAD9O15198 467 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CHMP2AO43633 222 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 OPHN1O60890 802 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KCNJ13O60928 360 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KRT36O76013 467 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 PDE9AO76083 593 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 MFN2O95140 757 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 KLKB1P03952 638 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 C4BPAP04003 597 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 RLN1P04808 185 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FESP07332 822 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 GRPP07492 148 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CTSBP07858 339 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 FHP07954 510 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 ZNF735P0CB33 412 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CYP2C9P11712 490 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 POU2F1P14859 743 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 TIMP2P16035 220 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 VCLP18206 1134 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CYP11B2P19099 503 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 DDCP20711 480 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 MSNP26038 577 aaKnown RBP3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 CD1BP29016 333 aa3.17□□□□□ -1.9
CTDSPL-203ENST00000416688 RPL9P32969 192 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms