RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 ANKRD13AQ8IZ07 590 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZCCHC7Q8N3Z6 543 aaKnown RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 MCPH1Q8NEM0 835 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 ZFP90Q8TF47 636 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PTCD2Q8WV60 388 aaKnown RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 RBBP8Q99708 897 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 CPNE1Q99829 537 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 OSBPL10Q9BXB5 764 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRPV5Q9NQA5 729 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 SOWAHBA6NEL2 793 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 C9JVG2 144 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRIM24O15164 1050 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 MAN1A2O60476 641 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PROZP22891 400 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 TMBIM6P55061 237 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PIGFQ07326 219 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PAGE2BQ5JRK9 111 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 CRTC3Q6UUV7 619 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 SLC22A16Q86VW1 577 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 FBXO16Q8IX29 292 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 MFSD2AQ8NA29 543 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 RAB2BQ8WUD1 216 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 CPB2Q96IY4 423 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 FCRL3Q96P31 734 aaPredicted RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 IL12RB2Q99665 862 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 C9orf16Q9BUW7 83 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 RUVBL2Q9Y230 463 aaKnown RBP14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 TIMM22Q9Y584 194 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 PPP2R3BQ9Y5P8 575 aa14.82□□□□□ -0.04
NCKIPSD-204ENST00000416649 LOXHD1Q8IVV2 1947 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 ATP6AP2A0A1C7CYW4 349 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 MED7O43513 233 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 GCATO75600 419 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 ATP6AP2O75787 350 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 DGAT1O75907 488 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 ENDOD1O94919 500 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 OXTRP30559 389 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 SERPINB1P30740 379 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 CAPGP40121 348 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 LRP8Q14114 963 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 NDUFA5Q16718 116 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 TMEM132AQ24JP5 1023 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 RPS27LQ71UM5 84 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 NIPA1Q7RTP0 329 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 TAS2R42Q7RTR8 314 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 SLCO6A1Q86UG4 719 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 ANKRD13BQ86YJ7 626 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 CMTR2Q8IYT2 770 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 KCTD4Q8WVF5 259 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 GPRASP2Q96D09 838 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 PORCNQ9H237 461 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 VRTNQ9H8Y1 702 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 HMGXB4Q9UGU5 601 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 SBF1O95248 1867 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 AP3B1O00203 1094 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 SLC22A2O15244 555 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 MSI1O43347 362 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 PSAPP07602 524 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 MAGP20916 626 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 PSMA4P25789 261 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 ADSLP30566 484 aaPredicted RBP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 NSUN2Q08J23 767 aaKnown RBP eCLIP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 TRAP1Q12931 704 aaKnown RBP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 AGAP7PQ5VUJ5 663 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 PPP2R2DQ66LE6 453 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 ERO1BQ86YB8 467 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 DNAAF3Q8N9W5 541 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 CCNYQ8ND76 341 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 USP33Q8TEY7 942 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 HDAC10Q969S8 669 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 FAR2Q96K12 515 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 ARPC5LQ9BPX5 153 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 TP63Q9H3D4 680 aaPredicted RBP14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 EPS8L2Q9H6S3 715 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 MARCH7Q9H992 704 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 FAM49BQ9NUQ9 324 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 VTI1BQ9UEU0 232 aa14.81□□□□□ -0.04
NCKIPSD-204ENST00000416649 MICAL2O94851 1124 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 ENO2P09104 434 aaPredicted RBP14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 UBA1P22314 1058 aaKnown RBP14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 PSMB4P28070 264 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 GJA5P36382 358 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 LIMK2P53671 638 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 SLC13A2Q13183 592 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 NOL9Q5SY16 702 aaKnown RBP14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 FAM35AQ86V20 835 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 CALML6Q8TD86 181 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 LRCH3Q96II8 777 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 UHRF1Q96T88 793 aaPredicted RBP14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 RNF38Q9H0F5 515 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 SMPD3Q9NY59 655 aaPredicted RBP14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 ANKMY1Q9P2S6 941 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 MTRRQ9UBK8 725 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 RLFQ13129 1914 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 SDHDO14521 159 aa14.8□□□□□ -0.04
NCKIPSD-204ENST00000416649 UBDO15205 165 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms