RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MCM8Q9UJA3 840 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 GMEB2Q9UKD1 530 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 SLC8A2Q9UPR5 921 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 CPQQ9Y646 472 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 GPR179Q6PRD1 2367 aa5.49□□□□□ -1.53
LINC00342-201ENST00000412393 PLXND1Q9Y4D7 1925 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 CFAP54Q96N23 3096 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 E2F8A0AVK6 867 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 C7orf72A4D263 438 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 TRIM49BA6NDI0 452 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 C5orf60A6NFR6 353 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 HMGB1P1B2RPK0 211 aaPredicted RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 SLC16A3O15427 465 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 TLR5O60602 858 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 RTN2O75298 545 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 PPFIA2O75334 1257 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 BEST1O76090 585 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 FAM107AO95990 144 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 FUCA1P04066 466 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 CYP17A1P05093 508 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 RHOXF2BP0C7M4 288 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ZDHHC11BP0C7U3 371 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 IRF1P10914 325 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 NEFHP12036 1026 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ACO1P21399 889 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 HOXA6P31267 233 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 HOXC13P31276 330 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 KRT9P35527 623 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 CYLC1P35663 651 aaPredicted RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 OPRD1P41143 372 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ID4P47928 161 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 TUBP50607 506 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 MNAT1P51948 309 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 COPB1P53618 953 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 NAP1L1P55209 391 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ZBED6P86452 979 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 LRRC63Q05C16 580 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 DMWDQ09019 674 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 SRSF5Q13243 272 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 XRCC4Q13426 336 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 SIM2Q14190 667 aaPredicted RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 KRT31Q15323 416 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 DHCR24Q15392 516 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ZKSCAN8Q15776 578 aaPredicted RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 LPAL2Q16609 132 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ZNF394Q53GI3 561 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 TCP11X2Q5H9J9 407 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 DCAF17Q5H9S7 520 aaPredicted RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 SNX30Q5VWJ9 437 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ANKRD40Q6AI12 368 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 KLHL10Q6JEL2 608 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 CEP68Q76N32 757 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 GPRIN1Q7Z2K8 1008 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 WDR5BQ86VZ2 330 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ZC3H3Q8IXZ2 948 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 FAM26EQ8N5C1 309 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ARFGAP2Q8N6H7 521 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 OTUD6BQ8N6M0 293 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 RPLP0P6Q8NHW5 317 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 CENPTQ96BT3 561 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 MIEF2Q96C03 454 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 DHTKD1Q96HY7 919 aaPredicted RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ANKRD27Q96NW4 1050 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ERGIC2Q96RQ1 377 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 RHOXF2Q9BQY4 288 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 NACA2Q9H009 215 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 CCSER2Q9H7U1 834 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 GDF3Q9NR23 364 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 TLR8Q9NR97 1041 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 TBC1D14Q9P2M4 693 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 FTSJ1Q9UET6 329 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 ARMCX3Q9UH62 379 aaPredicted RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 SUFUQ9UMX1 484 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 SNX12Q9UMY4 172 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
LINC00342-201ENST00000412393 COQ4Q9Y3A0 265 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 SH3BP1Q9Y3L3 701 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 MYO15AQ9UKN7 3530 aa5.48□□□□□ -1.53
LINC00342-201ENST00000412393 CCDC163A0A0D9SF12 145 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 GRID2IPA4D2P6 1211 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 LGALS16A8MUM7 142 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 HHLA1C9JL84 531 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 KIAA0754O94854 1291 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 TP53P04637 393 aaPredicted RBP5.47□□□□□ -1.53
LINC00342-201ENST00000412393 APODP05090 189 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 RETP07949 1114 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 SLC8A1P32418 973 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 ATP5C1P36542 298 aaKnown RBP5.47□□□□□ -1.53
LINC00342-201ENST00000412393 CCT5P48643 541 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 PXNP49023 591 aaPredicted RBP5.47□□□□□ -1.53
LINC00342-201ENST00000412393 PGFP49763 221 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 KIF11P52732 1056 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 VAV2P52735 878 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 RAD23BP54727 409 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 INHBCP55103 352 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 YWHAEP62258 255 aaKnown RBP5.47□□□□□ -1.53
LINC00342-201ENST00000412393 GAD2Q05329 585 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 GOLGA8FQ08AF8 430 aa5.47□□□□□ -1.53
LINC00342-201ENST00000412393 GOLGA8DPQ0D2H9 430 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms