RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 TIMP2P16035 220 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 CA4P22748 312 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 PSMB4P28070 264 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 ACSL1P33121 698 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 FNTAP49354 379 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 ADPRHP54922 357 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 GSTA5Q7RTV2 222 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 GLIS1Q8NBF1 620 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 UBP1Q9NZI7 540 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 CDC23Q9UJX2 597 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 PCDHB9Q9Y5E1 797 aa29.58■■■□□ 2.33
USP42-202ENST00000404008 PLRG1O43660 514 aaKnown RBP29.57■■■□□ 2.32
USP42-202ENST00000404008 ETS1P14921 441 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 ABL2P42684 1182 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 TAS2R38P59533 333 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 LMNB2Q03252 620 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 UGP2Q16851 508 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 ARMC12Q5T9G4 340 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 PRUNE1Q86TP1 453 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 KIF18AQ8NI77 898 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 RAB7BQ96AH8 199 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 VPS45Q9NRW7 570 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 FAM153AQ9UHL3 310 aa29.57■■■□□ 2.32
USP42-202ENST00000404008 METTL18O95568 372 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 CPP00450 1065 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 PDHA1P08559 390 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 BCKDHBP21953 392 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 POLR2LP62875 67 aaKnown RBP29.56■■■□□ 2.32
USP42-202ENST00000404008 PARP6Q2NL67 630 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 KDELC1Q6UW63 502 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 TTC7BQ86TV6 843 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 PAF1Q8N7H5 531 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 OR14C36Q8NHC7 312 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 DDX47Q9H0S4 455 aaKnown RBP29.56■■■□□ 2.32
USP42-202ENST00000404008 PCDH9Q9HC56 1237 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 CHKBQ9Y259 395 aa29.56■■■□□ 2.32
USP42-202ENST00000404008 UPK3BL1B0FP48 263 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 UPK3BL2E5RIL1 263 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 CCDC188H7C350 402 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 PMPCBO75439 489 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 SEMA4FO95754 770 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 SUOXP51687 545 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 PCSK7Q16549 785 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 LRRC73Q5JTD7 316 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 SLC36A4Q6YBV0 504 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 C11orf74Q86VG3 221 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 PPP1R2P1Q96PQ5 205 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 KDM4CQ9H3R0 1056 aa29.55■■■□□ 2.32
USP42-202ENST00000404008 SPINT1O43278 529 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 AP1G1O43747 822 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 ANXA9O76027 345 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 PRLP01236 227 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 ZSCAN5DPP0CG00 497 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 ACTN2P35609 894 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 PTPN5P54829 565 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 MPP3Q13368 585 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 PRPSAP1Q14558 356 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 ZC3H14Q6PJT7 736 aaKnown RBP29.54■■■□□ 2.32
USP42-202ENST00000404008 KLHDC8BQ8IXV7 354 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 PIH1D2Q8WWB5 315 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 TRIB3Q96RU7 358 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 MLPHQ9BV36 600 aaPredicted RBP29.54■■■□□ 2.32
USP42-202ENST00000404008 PAK5Q9P286 719 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 PHTF1Q9UMS5 762 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 AAR2Q9Y312 384 aaKnown RBP29.54■■■□□ 2.32
USP42-202ENST00000404008 FADS3Q9Y5Q0 445 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 R4GN57 208 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 THADAQ6YHU6 1953 aa29.54■■■□□ 2.32
USP42-202ENST00000404008 AREL1O15033 823 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 MAP3K13O43283 966 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 ZNF500O60304 480 aaPredicted RBP29.53■■■□□ 2.32
USP42-202ENST00000404008 XPAP23025 273 aaPredicted RBP29.53■■■□□ 2.32
USP42-202ENST00000404008 RPL22P35268 128 aaKnown RBP29.53■■■□□ 2.32
USP42-202ENST00000404008 GEMP55040 296 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 WNT3AP56704 352 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 OR2T34Q8NGX1 318 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 GRK7Q8WTQ7 553 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 MRGPRX2Q96LB1 330 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 GPR174Q9BXC1 333 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 IRF2BPLQ9H1B7 796 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 PCDH12Q9NPG4 1184 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 PCYOX1Q9UHG3 505 aa29.53■■■□□ 2.32
USP42-202ENST00000404008 FEZ2Q9UHY8 353 aaPredicted RBP29.53■■■□□ 2.32
USP42-202ENST00000404008 ARIH1Q9Y4X5 557 aaPredicted RBP29.53■■■□□ 2.32
USP42-202ENST00000404008 LRRC72A6NJI9 287 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 ESPNB1AK53 854 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 NDUFS2O75306 463 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 RPL26P61254 145 aaKnown RBP29.52■■■□□ 2.32
USP42-202ENST00000404008 RPL6Q02878 288 aaKnown RBP29.52■■■□□ 2.32
USP42-202ENST00000404008 CDK18Q07002 472 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 C4orf22Q6V702 233 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 ZNF572Q7Z3I7 529 aaPredicted RBP29.52■■■□□ 2.32
USP42-202ENST00000404008 SPATA4Q8NEY3 305 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 IFT43Q96FT9 208 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 FEM1CQ96JP0 617 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 ADGRE3Q9BY15 652 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 PREBQ9HCU5 417 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 RPL26L1Q9UNX3 145 aaKnown RBP29.52■■■□□ 2.32
USP42-202ENST00000404008 ITM2BQ9Y287 266 aa29.52■■■□□ 2.32
USP42-202ENST00000404008 PPIL1Q9Y3C6 166 aa29.52■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms