RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 ELMO1Q92556 727 aa8.42□□□□□ -1.06
SPTLC3-201ENST00000399002 C7orf26Q96N11 449 aa8.42□□□□□ -1.06
SPTLC3-201ENST00000399002 SEMA4BQ9NPR2 832 aaPredicted RBP8.42□□□□□ -1.06
SPTLC3-201ENST00000399002 TRPS1Q9UHF7 1281 aa8.42□□□□□ -1.06
SPTLC3-201ENST00000399002 BTBD3Q9Y2F9 522 aa8.42□□□□□ -1.06
SPTLC3-201ENST00000399002 CD86P42081 329 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 MATKP42679 507 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 PTDSS1P48651 473 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 ACTR3P61158 418 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 MTX3Q5HYI7 312 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 EARS2Q5JPH6 523 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM46CQ5VWP2 391 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 RBFAQ8N0V3 343 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 TEX47Q8TBZ9 253 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 PPP1R14AQ96A00 147 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 DNAJC19Q96DA6 116 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 TDRD1Q9BXT4 1180 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 ATXN3LQ9H3M9 355 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 EHD3Q9NZN3 535 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 RAPGEFL1Q9UHV5 662 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 ING4Q9UNL4 249 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 F8VP50 259 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 EML1O00423 815 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 MAP3K6O95382 1288 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 CCDC166P0CW27 439 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 UBA1P22314 1058 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 RPL26P61254 145 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 MRPS5P82675 430 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 TCEAL5Q5H9L2 206 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 APOBEC3HQ6NTF7 200 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 VSIG10LQ86VR7 867 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 LENG1Q96BZ8 264 aaPredicted RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 DUSP16Q9BY84 665 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 PCDHGB3Q9Y5G1 929 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 AZIN1O14977 448 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 RECQL4O94761 1208 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 OR6B1O95007 311 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 POMCP01189 267 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 S100GP29377 79 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 PPP3CAQ08209 521 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 MAPKAPK3Q16644 382 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 PACS2Q86VP3 889 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 OFCC1Q8IZS5 231 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 COQ7Q99807 217 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 RNPEPQ9H4A4 650 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 ZDHHC6Q9H6R6 413 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 NUDT4Q9NZJ9 180 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 ST3GAL5Q9UNP4 418 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 TSC22D2O75157 780 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 IFNGP01579 166 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 ACADLP28330 430 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 MRPS22P82650 360 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 TMEM63BQ5T3F8 832 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 BICRALQ6AI39 1079 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 GATAD2AQ86YP4 633 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 WDR48Q8TAF3 677 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 ZNF671Q8TAW3 534 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 REXO5Q96IC2 774 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM210AQ96ND0 272 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 AASDHPPTQ9NRN7 309 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 VPS45Q9NRW7 570 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 SEMA3GQ9NS98 782 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 GMIPQ9P107 970 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 PCDHGA4Q9Y5G9 962 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 CCDC162PA2VCL2 907 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 SMIM10L2AP0DMW4 78 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 SMIM10L2BP0DMW5 78 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 LPOP22079 712 aaPredicted RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 GSTT1P30711 240 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 IRF8Q02556 426 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 PFKFB4Q16877 469 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 NBPF12Q5TAG4 269 aaPredicted RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM117BQ6P1L5 589 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM20CQ8IXL6 584 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 BORCS5Q969J3 196 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 AHCYL2Q96HN2 611 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 INTS7Q9NVH2 962 aaKnown RBP8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 COMMD9Q9P000 198 aa8.41□□□□□ -1.06
SPTLC3-201ENST00000399002 FAM237BA0A1B0GVD1 139 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 TSPAN3O60637 253 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 ULK1O75385 1050 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 FAUP35544 74 aaKnown RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 IKBKEQ14164 716 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 PACS1Q6VY07 963 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 KRT77Q7Z794 578 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 TDRPQ86YL5 185 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 UNC5BQ8IZJ1 945 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SCAIQ8N9R8 606 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SUSD6Q92537 303 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 GRIP2Q9C0E4 1043 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SNX15Q9NRS6 342 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 IFT80Q9P2H3 777 aaPredicted RBP8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 KLQ9UEF7 1012 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 LGALS13Q9UHV8 139 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SPATA2Q9UM82 520 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 PCDHGC3Q9UN70 934 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 SSR3Q9UNL2 185 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 LMO7Q8WWI1 1683 aa8.4□□□□□ -1.06
SPTLC3-201ENST00000399002 NDUFB5O43674 189 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms