RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 CXorf21Q9HAI6 301 aa10.06□□□□□ -0.8
PSEN1-204ENST00000394164 CHRAC1Q9NRG0 131 aa10.06□□□□□ -0.8
PSEN1-204ENST00000394164 SFMBT1Q9UHJ3 866 aa10.06□□□□□ -0.8
PSEN1-204ENST00000394164 EMCNQ9ULC0 261 aa10.06□□□□□ -0.8
PSEN1-204ENST00000394164 NOX1Q9Y5S8 564 aa10.06□□□□□ -0.8
PSEN1-204ENST00000394164 USP3Q9Y6I4 520 aa10.06□□□□□ -0.8
PSEN1-204ENST00000394164 CFAP99D6REC4 459 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 H3BMQ9 156 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 CNOT3O75175 753 aaKnown RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 SPAG6O75602 509 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 HSPA4LO95757 839 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 JCHAINP01591 159 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 AVPR1AP37288 418 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ACADSBP45954 432 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 NKX2-5P52952 324 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 RALGDSQ12967 914 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 PMS2P3Q13401 168 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 SF3B4Q15427 424 aaKnown RBP eCLIP10.05□□□□□ -0.81e-6■■■□□ 16.5
PSEN1-204ENST00000394164 RGS21Q2M5E4 152 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ZNF829Q3KNS6 432 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 DHRS4L2Q6PKH6 230 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ARHGAP36Q6ZRI8 547 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 OTOP3Q7RTS5 596 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 BTLAQ7Z6A9 289 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 STARD8Q92502 1023 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 COG8Q96MW5 612 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 TKTL2Q9H0I9 626 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 RPF2Q9H7B2 306 aaKnown RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 PCDH12Q9NPG4 1184 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 DAPK2Q9UIK4 370 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 CROTQ9UKG9 612 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 POU2F3Q9UKI9 436 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 STAP1Q9ULZ2 295 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 SORCS3Q9UPU3 1222 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 DERAQ9Y315 318 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 MBLAC1A4D2B0 266 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 KRBA1A5PL33 1030 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 IQCA1LA6NCM1 817 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 FAM159BA6NKW6 160 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 MSI1O43347 362 aaKnown RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 TPST1O60507 370 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 GSRP00390 522 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 OR4Q2P0C623 313 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 PRDX6P30041 224 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 CRHR1P34998 444 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 NOS2P35228 1153 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ADRA1BP35368 520 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 NR2C2P49116 596 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 PCYT1AP49585 367 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ZNF157P51786 506 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 IRF9Q00978 393 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ART3Q13508 389 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 SEMA5AQ13591 1074 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 IKBKEQ14164 716 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 PCLAFQ15004 111 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 USP41Q3LFD5 358 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ZNF467Q7Z7K2 595 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 FAM35AQ86V20 835 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ZC3H7AQ8IWR0 971 aaKnown RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 TMEM102Q8N9M5 508 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 SPATA22Q8NHS9 363 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 ARNTL2Q8WYA1 636 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 HSFY1Q96LI6 401 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 RTKNQ9BST9 563 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 CLK4Q9HAZ1 481 aaKnown RBP10.05□□□□□ -0.8
PSEN1-204ENST00000394164 GID8Q9NWU2 228 aa10.05□□□□□ -0.8
PSEN1-204ENST00000394164 RALBP11234 206 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 GLRBP48167 497 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 PGFP49763 221 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 ZBTB17Q13105 803 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 STRADAQ7RTN6 431 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 LYSMD3Q7Z3D4 306 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 ALDH16A1Q8IZ83 802 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 OFCC1Q8IZS5 231 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 ZMIZ2Q8NF64 920 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 GPR152Q8TDT2 470 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 NPY6RQ99463 290 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 AGO3Q9H9G7 860 aaKnown RBP10.04□□□□□ -0.8
PSEN1-204ENST00000394164 POLR1BQ9H9Y6 1135 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 WDR41Q9HAD4 459 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 GDAP2Q9NXN4 497 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 TMEM216Q9P0N5 145 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 OR12D3Q9UGF7 316 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 GIT1Q9Y2X7 761 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 A0A1W2PQ67 120 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 FAM149AA5PLN7 773 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 ARL5CA6NH57 179 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 TRDMT1O14717 391 aaKnown RBP10.04□□□□□ -0.8
PSEN1-204ENST00000394164 TNPO2O14787 897 aaKnown RBP10.04□□□□□ -0.8
PSEN1-204ENST00000394164 TIPRLO75663 272 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 ITGB1P05556 798 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 THP07101 528 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 PABPC1P11940 636 aaKnown RBP10.04□□□□□ -0.8
PSEN1-204ENST00000394164 NFKB1P19838 968 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 GABRB3P28472 473 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 CD52P31358 61 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 SOX11P35716 441 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 THPOP40225 353 aa10.04□□□□□ -0.8
PSEN1-204ENST00000394164 PNPLA4P41247 253 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms