RNA–Protein interactions for RNA: ENST00000393540.7

CCDC110-202, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC110, Length 2,722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-202ENST00000393540 ZNF549Q6P9A3 640 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 CNSTQ6PJW8 725 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 CCDC121Q6ZUS5 278 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 RNF135Q8IUD6 432 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 SLC41A1Q8IVJ1 513 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 C10orf107Q8IVU9 208 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 OTUD6BQ8N6M0 293 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 ARL14EPQ8N8R7 260 aaPredicted RBP3.81□□□□□ -1.8
CCDC110-202ENST00000393540 KLHL23Q8NBE8 558 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 PDZD8Q8NEN9 1154 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 SKA1Q96BD8 255 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 GRAMD1AQ96CP6 724 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 SLC7A6OSQ96CW6 309 aaPredicted RBP3.81□□□□□ -1.8
CCDC110-202ENST00000393540 C7orf26Q96N11 449 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 OLFM1Q99784 485 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 OMDQ99983 421 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 SEMA3CQ99985 751 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 FERMT1Q9BQL6 677 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 NSRP1Q9H0G5 558 aaKnown RBP3.81□□□□□ -1.8
CCDC110-202ENST00000393540 MAGEH1Q9H213 219 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 SP110Q9HB58 689 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 IL23AQ9NPF7 189 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 ACSS2Q9NR19 701 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 SMPD4Q9NXE4 827 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 ZFATQ9P243 1243 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 UXTQ9UBK9 157 aaPredicted RBP3.81□□□□□ -1.8
CCDC110-202ENST00000393540 LHX3Q9UBR4 397 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 IKBKGQ9Y6K9 419 aa3.81□□□□□ -1.8
CCDC110-202ENST00000393540 ILVBLA1L0T0 632 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 F5H5T6 163 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 INSIG1O15503 277 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 BUD23O43709 281 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PRAMEF12O95522 483 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 S1PR4O95977 384 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 MT-CO1P00395 513 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 C2P06681 752 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 GSTA1P08263 222 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PDHA1P08559 390 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 GJA1P17302 382 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SERPINH1P50454 418 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CSE1LP55060 971 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CDKN2DP55273 166 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 IRX4P78413 519 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 GALNT3Q14435 633 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 GRIN2CQ14957 1233 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SLC14A2Q15849 920 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 INSCQ1MX18 579 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ANO4Q32M45 955 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 LRIT3Q3SXY7 679 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TMEM240Q5SV17 173 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PDPK2PQ6A1A2 396 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ASTLQ6HA08 431 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 KIAA1841Q6NSI8 718 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 KYAT3Q6YP21 454 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CHST9Q7L1S5 443 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TTC7BQ86TV6 843 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 LDB1Q86U70 411 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 GPR65Q8IYL9 337 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 APCDD1Q8J025 514 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 LSMEM2Q8N112 164 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CNPY4Q8N129 248 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SPATA6LQ8N4H0 392 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 MDGA1Q8NFP4 955 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PTCD2Q8WV60 388 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 BADQ92934 168 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 E2F7Q96AV8 911 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 EID2BQ96D98 161 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PTCD3Q96EY7 689 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF599Q96NL3 588 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PSKH2Q96QS6 385 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CDK5RAP1Q96SZ6 601 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TSSK1BQ9BXA7 367 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SMG9Q9H0W8 520 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 RHOJQ9H4E5 214 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SUDS3Q9H7L9 328 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SLC40A1Q9NP59 571 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 FBXO6Q9NRD1 293 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 HCFC1R1Q9NWW0 138 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 TRPM5Q9NZQ8 1165 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 COPG2Q9UBF2 871 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 MED16Q9Y2X0 877 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ZNF281Q9Y2X9 895 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ARL5AQ9Y689 179 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CAPN7Q9Y6W3 813 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 A0A096LPK6 155 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 CAPN14A8MX76 684 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 K7ERQ8 282 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 HGSO14964 777 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PHGDHO43175 533 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 BAIAP3O94812 1187 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PAPSS2O95340 614 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 PIRTP0C851 137 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ALOX15P16050 662 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SPRP35270 261 aaPredicted RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 AVPR1AP37288 418 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 ALDH1A3P47895 512 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 LEPRP48357 1165 aaKnown RBP3.8□□□□□ -1.8
CCDC110-202ENST00000393540 KCNC1P48547 511 aa3.8□□□□□ -1.8
CCDC110-202ENST00000393540 SLC11A2P49281 568 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms