RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 NOS2P35228 1153 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PRMT9Q6P2P2 845 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 HID1Q8IV36 788 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 ATL1Q8WXF7 558 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 UBE2E3Q969T4 207 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 SGK2Q9HBY8 427 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 GPC6Q9Y625 555 aaPredicted RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 TLR5O60602 858 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 IL12BP29460 328 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 GP5P40197 560 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 MRPS35P82673 323 aaKnown RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 TRAF3Q13114 568 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 AADACL2Q6P093 401 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CFAP206Q8IYR0 622 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 KCT2Q8NC54 265 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 DNAJB14Q8TBM8 379 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 TCP10LQ8TDR4 215 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 EEF1AKMT1Q8WVE0 214 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CRISPLD1Q9H336 500 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 DDX4Q9NQI0 724 aaKnown RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 DLG4P78352 724 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 GRSF1Q12849 480 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PTPN18Q99952 460 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CLDND1Q9NY35 253 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 ZNF222Q9UK12 451 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 AXIN1O15169 862 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PSIP1O75475 530 aaKnown RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CALB2P22676 271 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 RXRGP48443 463 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 DGKEP52429 567 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PYDC2Q56P42 97 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 KLHL35Q6PF15 583 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 AFTPHQ6ULP2 937 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 GALNT7Q86SF2 657 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CADM2Q8N3J6 435 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 UBR7Q8N806 425 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 DSN1Q9H410 356 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 RASSF1Q9NS23 344 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 ABCA6Q8N139 1617 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 MRASO14807 208 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 DCXO43602 365 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 OR10H3O60404 316 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 ALPPL2P10696 532 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 GNSP15586 552 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 ITPKAP23677 461 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 ZNF268Q14587 947 aaPredicted RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 RFX4Q33E94 735 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 LRRC73Q5JTD7 316 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CCDC54Q8NEL0 328 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PJA1Q8NG27 643 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 NDRG1Q92597 394 aaKnown RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 LINGO1Q96FE5 620 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 SLC38A2Q96QD8 506 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CLN6Q9NWW5 311 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CMTM6Q9NX76 183 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 KIAA1522Q9P206 1035 aaPredicted RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PER2O15055 1255 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 GRM6O15303 877 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 ZNF208O43345 1280 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 C1QBPQ07021 282 aaKnown RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CPSF6Q16630 551 aaKnown RBP eCLIP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 LYPLAL1Q5VWZ2 237 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PGBD2Q6P3X8 592 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 PCDH20Q8N6Y1 951 aaKnown RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 DNASE1L2Q92874 299 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 COMMD9Q9P000 198 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 CNOT6Q9ULM6 557 aaKnown RBP14.18□□□□□ -0.14
TRIM13-202ENST00000378182 NAALADL1Q9UQQ1 740 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
TRIM13-202ENST00000378182 MDM4O15151 490 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 FGF10O15520 208 aaPredicted RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 MSI1O43347 362 aaKnown RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 ALDH4A1P30038 563 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 LINGO4Q6UY18 593 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 RIOX2Q8IUF8 465 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 SVOPQ8N4V2 548 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 LENG1Q96BZ8 264 aaPredicted RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 LRRC39Q96DD0 335 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 A0A075B6Q4 140 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 MFN2O95140 757 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 SNUPNO95149 360 aaKnown RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 LDLRP01130 860 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 CCNA2P20248 432 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 PPM1AP35813 382 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 KRR1Q13601 381 aaKnown RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 PSTKQ8IV42 348 aaKnown RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 OR52K2Q8NGK3 314 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 TBCBQ99426 244 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 C1orf50Q9BV19 199 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 PABPC3Q9H361 631 aaKnown RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 LDAHQ9H6V9 325 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 CCNDBP1O95273 360 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 TRUB2O95900 331 aaKnown RBP14.17□□□□□ -0.14
TRIM13-202ENST00000378182 CDC25CP30307 473 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 TIE1P35590 1138 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 ARHGDIBP52566 201 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 TMC5Q6UXY8 1006 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 CATSPERGQ6ZRH7 1159 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 SLC9A6Q92581 669 aa14.17□□□□□ -0.14
TRIM13-202ENST00000378182 PRCCQ92733 491 aaPredicted RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms