RNA–Protein interactions for RNA: ENST00000377612.8

COMMD6-202, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-202ENST00000377612 FAM228BP0C875 321 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 MYBL1P10243 752 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 PCK1P35558 622 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 MMP12P39900 470 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 UBASH3AP57075 661 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 SLC25A11Q02978 314 aaKnown RBP18.03■□□□□ 0.48
COMMD6-202ENST00000377612 RAD51Q06609 339 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 SGCGQ13326 291 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 DPYSL2Q16555 572 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 TMEM52BQ4KMG9 183 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 DCP2Q8IU60 420 aaKnown RBP18.03■□□□□ 0.48
COMMD6-202ENST00000377612 CAMK1DQ8IU85 385 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 PSTKQ8IV42 348 aaKnown RBP18.03■□□□□ 0.48
COMMD6-202ENST00000377612 RFFLQ8WZ73 363 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 APOLD1Q96LR9 279 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 NCAPGQ9BPX3 1015 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 SP110Q9HB58 689 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 NLGN3Q9NZ94 848 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 PTPRQQ9UMZ3 2332 aa18.03■□□□□ 0.48
COMMD6-202ENST00000377612 K7ESM1 405 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 TM7SF2O76062 418 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 PEX11BO96011 259 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 C6P13671 934 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 ZBED6P86452 979 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 RALGDSQ12967 914 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 TARDBPQ13148 414 aaKnown RBP eCLIP18.02■□□□□ 0.48
COMMD6-202ENST00000377612 ILKQ13418 452 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 CXorf40AQ8TE69 158 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 CPLX3Q8WVH0 158 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 SYN2Q92777 582 aaPredicted RBP18.02■□□□□ 0.48
COMMD6-202ENST00000377612 ECHDC3Q96DC8 303 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 SUV39H2Q9H5I1 410 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 ZWILCHQ9H900 591 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.02■□□□□ 0.48
COMMD6-202ENST00000377612 IFNKQ9P0W0 207 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 CAPN11Q9UMQ6 739 aa18.02■□□□□ 0.48
COMMD6-202ENST00000377612 UNC13CQ8NB66 2214 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 IGSF10Q6WRI0 2623 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 TTC24A2A3L6 582 aaPredicted RBP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 RIOK3O14730 519 aaKnown RBP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 SCAMP1O15126 338 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 SERPING1P05155 500 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 CELA2BP08218 269 aaPredicted RBP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 RARAP10276 462 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 CKMT1AP12532 417 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 GM2AP17900 193 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 AMPD1P23109 780 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 HCAR3P49019 387 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 HNRNPKP61978 463 aaKnown RBP eCLIP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 DAB2P98082 770 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 IL10RBQ08334 325 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 UGP2Q16851 508 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 WSCD2Q2TBF2 565 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 ZSCAN23Q3MJ62 389 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 KCTD16Q68DU8 428 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 POLNQ7Z5Q5 900 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 SRLQ86TD4 932 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 PGBD5Q8N414 524 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 PDCD7Q8N8D1 485 aaKnown RBP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 NIPA2Q8N8Q9 360 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 HSPH1Q92598 858 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 CSPG4P5Q96PW8 444 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 LRRC61Q9BV99 259 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 CINPQ9BW66 212 aaPredicted RBP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 PCDH18Q9HCL0 1135 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 MRPL47Q9HD33 250 aaKnown RBP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 IPO11Q9UI26 975 aaKnown RBP18.01■□□□□ 0.47
COMMD6-202ENST00000377612 ANAPC7Q9UJX3 599 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 ATP8A1Q9Y2Q0 1164 aa18.01■□□□□ 0.47
COMMD6-202ENST00000377612 CASC3O15234 703 aaKnown RBP18■□□□□ 0.47
COMMD6-202ENST00000377612 DAPK3O43293 454 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 GCATO75600 419 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 PALMO75781 387 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 CYP1A2P05177 515 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 JUPP14923 745 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 JUNDP17535 347 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 HNF1BP35680 557 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 CSNK1DP48730 415 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 SLC10A7Q0GE19 358 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 ELP6Q0PNE2 266 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 DEFB133Q30KQ1 61 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 C19orf48Q6RUI8 117 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 MACC1Q6ZN28 852 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 ZNF641Q96N77 438 aaPredicted RBP18■□□□□ 0.47
COMMD6-202ENST00000377612 TUBGCP5Q96RT8 1024 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 NUP85Q9BW27 656 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 XPO4Q9C0E2 1151 aaKnown RBP18■□□□□ 0.47
COMMD6-202ENST00000377612 LHX6Q9UPM6 363 aa18■□□□□ 0.47
COMMD6-202ENST00000377612 SMG1Q96Q15 3661 aaKnown RBP18■□□□□ 0.47
COMMD6-202ENST00000377612 H3BRJ5 948 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 TRAFD1O14545 582 aaPredicted RBP17.99■□□□□ 0.47
COMMD6-202ENST00000377612 AQP9O43315 295 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 CD48P09326 243 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 CDK4P11802 303 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 CDCP2Q5VXM1 449 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 BRAT1Q6PJG6 821 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 PHACTR4Q8IZ21 702 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 PELI3Q8N2H9 469 aa17.99■□□□□ 0.47
COMMD6-202ENST00000377612 DCBLD1Q8N8Z6 715 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms