RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MBNL1Q9NR56 388 aaKnown RBP21.26■□□□□ 0.99
VSX1-201ENST00000376707 PCSK1NQ9UHG2 260 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 SALL4Q9UJQ4 1053 aa21.26■□□□□ 0.99
VSX1-201ENST00000376707 CPED1A4D0V7 1026 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 ARHGAP42A6NI28 874 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 J3KR12 359 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 TOR1BO14657 336 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 RIOK3O14730 519 aaKnown RBP21.25■□□□□ 0.99
VSX1-201ENST00000376707 TPP1O14773 563 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 PRAMEF11O60813 436 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 TMEM52BQ4KMG9 183 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 PRRT3Q5FWE3 981 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 FIGNQ5HY92 759 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 FAXCQ5TGI0 409 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 MACC1Q6ZN28 852 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 ZNF571Q7Z3V5 609 aaPredicted RBP21.25■□□□□ 0.99
VSX1-201ENST00000376707 TP53I13Q8NBR0 393 aaPredicted RBP21.25■□□□□ 0.99
VSX1-201ENST00000376707 HCAR2Q8TDS4 363 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 SLC13A1Q9BZW2 595 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 TCEAL2Q9H3H9 227 aaPredicted RBP21.25■□□□□ 0.99
VSX1-201ENST00000376707 SUV39H2Q9H5I1 410 aa21.25■□□□□ 0.99
VSX1-201ENST00000376707 TDRD6O60522 2096 aaKnown RBP21.24■□□□□ 0.99
VSX1-201ENST00000376707 CSO75390 466 aaKnown RBP21.24■□□□□ 0.99
VSX1-201ENST00000376707 RNF8O76064 485 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 EIF4A3P38919 411 aaKnown RBP21.24■□□□□ 0.99
VSX1-201ENST00000376707 PAPOLAP51003 745 aaKnown RBP21.24■□□□□ 0.99
VSX1-201ENST00000376707 C1orf61Q13536 156 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 LRRC14Q15048 493 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 IRF4Q15306 451 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 NR0B2Q15466 257 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 CA9Q16790 459 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 UGP2Q16851 508 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 TBC1D25Q3MII6 688 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 ERMARDQ5T6L9 678 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 ERAP2Q6P179 960 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 EFL1Q7Z2Z2 1120 aaKnown RBP21.24■□□□□ 0.99
VSX1-201ENST00000376707 GLMNQ92990 594 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 ZNF641Q96N77 438 aaPredicted RBP21.24■□□□□ 0.99
VSX1-201ENST00000376707 SNRNP25Q9BV90 132 aaKnown RBP21.24■□□□□ 0.99
VSX1-201ENST00000376707 SLC39A8Q9C0K1 460 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 COQ6Q9Y2Z9 468 aa21.24■□□□□ 0.99
VSX1-201ENST00000376707 ATRXP46100 2492 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 TSPAN11A1L157 253 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 SYCE3A1L190 88 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 TMEM191CA6NGB0 347 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 PRPSAP2O60256 369 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 USP12O75317 370 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 SERPINC1P01008 464 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 ANXA6P08133 673 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 RPIAP49247 311 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 ADKP55263 362 aaKnown RBP21.23■□□□□ 0.99
VSX1-201ENST00000376707 PPARDQ03181 441 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 GUSBP11Q6P575 273 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 BRAT1Q6PJG6 821 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 RFX8Q6ZV50 586 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 TBATAQ96M53 351 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 TUBGCP5Q96RT8 1024 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 PEBP4Q96S96 227 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 LRRC61Q9BV99 259 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 CBX8Q9HC52 389 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 PCDH12Q9NPG4 1184 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 MYLKQ15746 1914 aa21.23■□□□□ 0.99
VSX1-201ENST00000376707 EME2A4GXA9 379 aaPredicted RBP21.22■□□□□ 0.99
VSX1-201ENST00000376707 GCATO75600 419 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 PALMO75781 387 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 FTLP02792 175 aaPredicted RBP21.22■□□□□ 0.99
VSX1-201ENST00000376707 MPOP05164 745 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 C6P13671 934 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 ERCC2P18074 760 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 GABREP78334 506 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 PPP6R3Q5H9R7 873 aaPredicted RBP21.22■□□□□ 0.99
VSX1-201ENST00000376707 CAMK1DQ8IU85 385 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 LSMEM2Q8N112 164 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 ARFGAP1Q8N6T3 406 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 PAF1Q8N7H5 531 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 FNIP1Q8TF40 1166 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 KCTD15Q96SI1 283 aaPredicted RBP21.22■□□□□ 0.99
VSX1-201ENST00000376707 ATP13A3Q9H7F0 1226 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 SP110Q9HB58 689 aa21.22■□□□□ 0.99
VSX1-201ENST00000376707 CNOT8Q9UFF9 292 aaKnown RBP21.22■□□□□ 0.99
VSX1-201ENST00000376707 PNMA8BQ9ULN7 279 aaPredicted RBP21.22■□□□□ 0.99
VSX1-201ENST00000376707 EIF4E1BA6NMX2 242 aaKnown RBP21.21■□□□□ 0.99
VSX1-201ENST00000376707 TMEM110-MUSTN1A8MSY1 372 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 LMO7DNF2Z398 122 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 DFFAO00273 331 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 DDX3XO00571 662 aaKnown RBP eCLIP21.21■□□□□ 0.99
VSX1-201ENST00000376707 MUSKO15146 869 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 LZTS3O60299 673 aaPredicted RBP21.21■□□□□ 0.99
VSX1-201ENST00000376707 BUB1BO60566 1050 aaPredicted RBP21.21■□□□□ 0.99
VSX1-201ENST00000376707 TGM2P21980 687 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 HTR1BP28222 390 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 SERPINA4P29622 427 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 MIPP30301 263 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 PBX1P40424 430 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 CSNK1DP48730 415 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 PEX5P50542 639 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 BLKP51451 505 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 KLHL30Q0D2K2 578 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 CCDC173Q0VFZ6 552 aa21.21■□□□□ 0.99
VSX1-201ENST00000376707 ACAP1Q15027 740 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms