RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 CHKBQ9Y259 395 aa23.13■■□□□ 1.29
HLA-C-202ENST00000376237 FAM170BA6NMN3 283 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 RNASEH1O60930 286 aaKnown RBP23.12■■□□□ 1.29
HLA-C-202ENST00000376237 USP12O75317 370 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 LEFTY1O75610 366 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 PGLSO95336 258 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 FGF1P05230 155 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 HIF1AQ16665 826 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 ARSIQ5FYB1 569 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 KDELC2Q7Z4H8 507 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 CAND1Q86VP6 1230 aaKnown RBP23.12■■□□□ 1.29
HLA-C-202ENST00000376237 PDCD6IPQ8WUM4 868 aaKnown RBP23.12■■□□□ 1.29
HLA-C-202ENST00000376237 ECHDC3Q96DC8 303 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 FAM129BQ96TA1 746 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 NEUROG2Q9H2A3 272 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 PPM1HQ9ULR3 514 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 PCDHB9Q9Y5E1 797 aa23.12■■□□□ 1.29
HLA-C-202ENST00000376237 CHURC1-FNTBB4DL54 471 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 EIF3HO15372 352 aaKnown RBP eCLIP23.11■■□□□ 1.29
HLA-C-202ENST00000376237 ADAM23O75077 832 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 ATG13O75143 517 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 PIGNO95427 931 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 ALADP13716 330 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 HOXB2P14652 356 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 GRIA1P42261 906 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 POLR2LP62875 67 aaKnown RBP23.11■■□□□ 1.29
HLA-C-202ENST00000376237 CFAP58Q5T655 872 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 BRAT1Q6PJG6 821 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 CENPUQ71F23 418 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 ZNF534Q76KX8 674 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 PAF1Q8N7H5 531 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 OR52K1Q8NGK4 314 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 GRIN3AQ8TCU5 1115 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 NECAB3Q96P71 396 aaPredicted RBP23.11■■□□□ 1.29
HLA-C-202ENST00000376237 TBC1D17Q9HA65 648 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 MMP17Q9ULZ9 603 aa23.11■■□□□ 1.29
HLA-C-202ENST00000376237 ANKRD66B4E2M5 251 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 C1QTNF3-AMACRE9PGA6 284 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 PRLP01236 227 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 UGT2B4P06133 528 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 CTSLP07711 333 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 MAGEA3P43357 314 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 NPY2RP49146 381 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 ZNF805Q5CZA5 627 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 DNAJC21Q5F1R6 531 aaKnown RBP23.1■■□□□ 1.29
HLA-C-202ENST00000376237 FAM46CQ5VWP2 391 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 DENND5AQ6IQ26 1287 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 NDUFAF2Q8N183 169 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 RMDN1Q96DB5 314 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 LRRC39Q96DD0 335 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 PPP1R16AQ96I34 528 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 UHRF1Q96T88 793 aaPredicted RBP23.1■■□□□ 1.29
HLA-C-202ENST00000376237 APOL2Q9BQE5 337 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 BFARQ9NZS9 450 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 DKK3Q9UBP4 350 aa23.1■■□□□ 1.29
HLA-C-202ENST00000376237 PDHA1P08559 390 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 ATXN1LP0C7T5 689 aaKnown RBP23.09■■□□□ 1.29
HLA-C-202ENST00000376237 GRIA4P48058 902 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 EPHB1P54762 984 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 SIGLEC14Q08ET2 396 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 OLIG2Q13516 323 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 MAP9Q49MG5 647 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 SIRPB2Q5JXA9 342 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 ARMC3Q5W041 872 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 OR2T3Q8NH03 318 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 PIP4K2CQ8TBX8 421 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 EDAQ92838 391 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 KLHL32Q96NJ5 620 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 SRPK1Q96SB4 655 aaKnown RBP23.09■■□□□ 1.29
HLA-C-202ENST00000376237 RSPH9Q9H1X1 276 aaPredicted RBP23.09■■□□□ 1.29
HLA-C-202ENST00000376237 PHTF1Q9UMS5 762 aa23.09■■□□□ 1.29
HLA-C-202ENST00000376237 E7ESA3 106 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 IL1BP01584 269 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 MYBL2P10244 700 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 FZD5Q13467 585 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 BRD3Q15059 726 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 SLC25A41Q8N5S1 370 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 PIH1D2Q8WWB5 315 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 FOXQ1Q9C009 403 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 IL22Q9GZX6 179 aa23.08■■□□□ 1.29
HLA-C-202ENST00000376237 MTF2Q9Y483 593 aaPredicted RBP23.08■■□□□ 1.29
HLA-C-202ENST00000376237 UQCRHLA0A096LP55 91 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 A0A1W2PQF6 199 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 TSPAN11A1L157 253 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 SDR42E2A6NKP2 422 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 STK25O00506 426 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 ERLIN1O75477 346 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 CPP00450 1065 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 UQCRHP07919 91 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 NFKBIAP25963 317 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 CHRNA4P43681 627 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 GALNT3Q14435 633 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 SLMAPQ14BN4 828 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 FNBP1LQ5T0N5 605 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 EMBQ6PCB8 327 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 LPCAT1Q8NF37 534 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 PJA1Q8NG27 643 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 PPIL1Q9Y3C6 166 aa23.08■■□□□ 1.28
HLA-C-202ENST00000376237 MAGEB16A2A368 324 aa23.07■■□□□ 1.28
HLA-C-202ENST00000376237 CCDC151A5D8V7 595 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms