RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 GRIK1P39086 918 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PGFP49763 221 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 CLCNKBP51801 687 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 BNIP3Q12983 259 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 SH3D19Q5HYK7 790 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PERM1Q5SV97 790 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 SENP8Q96LD8 212 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 COLEC11Q9BWP8 271 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 ING2Q9H160 280 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 C1orf21Q9H246 121 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 AASSQ9UDR5 926 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 CNOT6Q9ULM6 557 aaKnown RBP11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TCAF2A6NFQ2 919 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 KPNA6O60684 536 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 SH3BGRLO75368 114 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 NFKBIAP25963 317 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 NOS2P35228 1153 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 CD151P48509 253 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PHEXP78562 749 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 ARHGAP1Q07960 439 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 INCA1Q0VD86 236 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 LAPTM4AQ15012 233 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 IMPG1Q17R60 797 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TMEM26Q6ZUK4 368 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TAC4Q86UU9 113 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TRIM74Q86UV6 250 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TRIM73Q86UV7 250 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 RP9Q8TA86 221 aaKnown RBP11.88□□□□□ -0.51
MCF2L-202ENST00000375597 ACMSDQ8TDX5 336 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 C3orf30Q96M34 536 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 RNF145Q96MT1 663 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 OLFM1Q99784 485 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 TBL1YQ9BQ87 522 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 PCDH10Q9P2E7 1040 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 CROTQ9UKG9 612 aa11.88□□□□□ -0.51
MCF2L-202ENST00000375597 A0A0C4DFX4 3053 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 UBXN8O00124 270 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 GPR39O43194 453 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 CDK4P11802 303 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 MAGEA3P43357 314 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 IST1P53990 364 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 FOXA1P55317 472 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 HPCAP84074 193 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 GNA12Q03113 381 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 MYBPC3Q14896 1274 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 TIGD2Q4W5G0 525 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 PIGGQ5H8A4 983 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 KIAA0319Q5VV43 1072 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 NAPEPLDQ6IQ20 393 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 GPR141Q7Z602 305 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 LSMEM2Q8N112 164 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 OSBPL2Q9H1P3 480 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 BPIFA1Q9NP55 256 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 UBQLN1Q9UMX0 589 aaKnown RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 OAZ3Q9UMX2 235 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 SDHDO14521 159 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 TPP2P29144 1249 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 SEMG2Q02383 582 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 DSC2Q02487 901 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 LAPTM5Q13571 262 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 OGFRL1Q5TC84 451 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 PLPPR4Q7Z2D5 763 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 PTGR2Q8N8N7 351 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 ZBED3Q96IU2 234 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 ZBTB26Q9HCK0 441 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 C6orf203Q9P0P8 240 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 RSL24D1Q9UHA3 163 aaKnown RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 MYRFQ9Y2G1 1151 aa11.87□□□□□ -0.51
MCF2L-202ENST00000375597 PRG3Q9Y2Y8 225 aaPredicted RBP11.87□□□□□ -0.51
MCF2L-202ENST00000375597 A0A0J9YVX5 310 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 CYP2B6P20813 491 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 ATP6V1B2P21281 511 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 OXTRP30559 389 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 DIO3P55073 304 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 COL9A2Q14055 689 aaPredicted RBP11.86□□□□□ -0.51
MCF2L-202ENST00000375597 GRB7Q14451 532 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 LPIN1Q14693 890 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 ZYG11AQ6WRX3 759 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 PRR23BQ6ZRT6 265 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 PGAM4Q8N0Y7 254 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 GIPC3Q8TF64 312 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 ZFAND2BQ8WV99 257 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 DRC3Q9H069 523 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 RIMS3Q9UJD0 308 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 RNF11Q9Y3C5 154 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 ENPP3O14638 875 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 EI24O14681 340 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 CLOCKO15516 846 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 MPOP05164 745 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 PTPN9P43378 593 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 KCNC1P48547 511 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 KLC3Q6P597 504 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 EXOC8Q8IYI6 725 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 CLEC4FQ8N1N0 589 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 CFAP52Q8N1V2 620 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 PPM1MQ96MI6 270 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 RHOJQ9H4E5 214 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 SLAMF8Q9P0V8 285 aa11.86□□□□□ -0.51
MCF2L-202ENST00000375597 BCAP29Q9UHQ4 241 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms