RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 CUZD1Q86UP6 607 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 SNX31Q8N9S9 440 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 FAM110BQ8TC76 370 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 DUSP16Q9BY84 665 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 NUP205Q92621 2012 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 PAPPA2Q9BXP8 1791 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 OTOFQ9HC10 1997 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 I6L893 689 aaPredicted RBP21.3■■□□□ 1
UPF3A-202ENST00000375299 DLGAP1O14490 977 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 PSMD3O43242 534 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 JCHAINP01591 159 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 HMOX2P30519 316 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 Q3C1V9 767 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 MAP7D1Q3KQU3 841 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 RWDD4Q6NW29 188 aaKnown RBP21.3■■□□□ 1
UPF3A-202ENST00000375299 MRM3Q9HC36 420 aaKnown RBP21.3■■□□□ 1
UPF3A-202ENST00000375299 PDGFCQ9NRA1 345 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 RNF19AQ9NV58 838 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 CDC14AQ9UNH5 594 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 MYLKQ15746 1914 aa21.3■■□□□ 1
UPF3A-202ENST00000375299 GNAO1P09471 354 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 ERO1BQ86YB8 467 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 CAMK1DQ8IU85 385 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 CBR4Q8N4T8 237 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 ZBTB8BQ8NAP8 495 aaPredicted RBP21.29■■□□□ 1
UPF3A-202ENST00000375299 OTUD5Q96G74 571 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 ADI1Q9BV57 179 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 CDHR5Q9HBB8 845 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 CYP4F12Q9HCS2 524 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 WDR6Q9NNW5 1121 aaKnown RBP21.29■■□□□ 1
UPF3A-202ENST00000375299 CCM2LQ9NUG4 571 aaPredicted RBP21.29■■□□□ 1
UPF3A-202ENST00000375299 GMPR2Q9P2T1 348 aaKnown RBP21.29■■□□□ 1
UPF3A-202ENST00000375299 PDCD11Q14690 1871 aaKnown RBP21.29■■□□□ 1
UPF3A-202ENST00000375299 TRIM64A6NGJ6 449 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 SPTLC1O15269 473 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 SLC1A2P43004 574 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 CBX3Q13185 183 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 TTLL4Q14679 1199 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 EML3Q32P44 896 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 TECRLQ5HYJ1 363 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 GPC2Q8N158 579 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 SIX6OS1Q8N1H7 587 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 OR9I1Q8NGQ6 314 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 GIPC3Q8TF64 312 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 ZUFSPQ96AP4 578 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 SLC39A3Q9BRY0 314 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 NPLQ9BXD5 320 aaPredicted RBP21.29■■□□□ 1
UPF3A-202ENST00000375299 RHOBTB2Q9BYZ6 727 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 ELP3Q9H9T3 547 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 IGSF5Q9NSI5 407 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 RBPJLQ9UBG7 517 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 TLL2Q9Y6L7 1015 aa21.29■■□□□ 1
UPF3A-202ENST00000375299 CAPN15O75808 1086 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 BEST1O76090 585 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 ARCN1P48444 511 aaKnown RBP21.28■■□□□ 1
UPF3A-202ENST00000375299 PFKPQ01813 784 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 KCTD2Q14681 263 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 POU6F1Q14863 301 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 PITRM1Q5JRX3 1037 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 TBCELQ5QJ74 424 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 ESRP1Q6NXG1 681 aaKnown RBP21.28■■□□□ 1
UPF3A-202ENST00000375299 OTOP3Q7RTS5 596 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 LYSMD3Q7Z3D4 306 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 EPHX4Q8IUS5 362 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 KLHDC8BQ8IXV7 354 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 CCDC126Q96EE4 140 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 TNIP3Q96KP6 325 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 HNRNPABQ99729 332 aaKnown RBP21.28■■□□□ 1
UPF3A-202ENST00000375299 TBC1D23Q9NUY8 699 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 MTF2Q9Y483 593 aaPredicted RBP21.28■■□□□ 1
UPF3A-202ENST00000375299 A8MT66 165 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 PIRO00625 290 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 CBFA2T3O75081 653 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 KCNA5P22460 613 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 ARNTP27540 789 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 CD151P48509 253 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 TKTL1P51854 596 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 SLC5A3P53794 718 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 SLC12A2P55011 1212 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 MERTKQ12866 999 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 CSHL1Q14406 222 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 ANKDD1AQ495B1 522 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP21.28■■□□□ 1
UPF3A-202ENST00000375299 SHCBP1Q8NEM2 672 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 APPL2Q8NEU8 664 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 DPF3Q92784 378 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 ROPN1LQ96C74 230 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 TBL1YQ9BQ87 522 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 CAMSAP3Q9P1Y5 1249 aaPredicted RBP21.28■■□□□ 1
UPF3A-202ENST00000375299 UBQLN1Q9UMX0 589 aaKnown RBP21.28■■□□□ 1
UPF3A-202ENST00000375299 ZNF711Q9Y462 761 aa21.28■■□□□ 1
UPF3A-202ENST00000375299 CLDN5O00501 218 aa21.27■■□□□ 1
UPF3A-202ENST00000375299 COQ9O75208 318 aa21.27■■□□□ 1
UPF3A-202ENST00000375299 IPO13O94829 963 aaKnown RBP21.27■■□□□ 1
UPF3A-202ENST00000375299 ATE1O95260 518 aa21.27■■□□□ 1
UPF3A-202ENST00000375299 NPR3P17342 541 aa21.27■■□□□ 1
UPF3A-202ENST00000375299 VARSP26640 1264 aaKnown RBP21.27■■□□□ 1
UPF3A-202ENST00000375299 ATP4BP51164 291 aa21.27■■□□□ 1
UPF3A-202ENST00000375299 RPS27LQ71UM5 84 aaKnown RBP21.27■■□□□ 1
UPF3A-202ENST00000375299 B3GALNT2Q8NCR0 500 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms