RNA–Protein interactions for RNA: ENST00000373006.5

USP49-201, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 1 (best) BASIC

Gene USP49, Length 3,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-201ENST00000373006 ELMO2Q96JJ3 720 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 MUC3BQ9H195 1237 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 SOX17Q9H6I2 414 aaPredicted RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 PIM2Q9P1W9 311 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 RCOR3Q9P2K3 495 aaPredicted RBP13.81□□□□□ -0.2
USP49-201ENST00000373006 CD300AQ9UGN4 299 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 CROTQ9UKG9 612 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 PARP14Q460N5 1801 aa13.81□□□□□ -0.2
USP49-201ENST00000373006 TKTP29401 623 aaKnown RBP13.8□□□□□ -0.2
USP49-201ENST00000373006 YAP1P46937 504 aaKnown RBP13.8□□□□□ -0.2
USP49-201ENST00000373006 YBX1P67809 324 aaKnown RBP13.8□□□□□ -0.2
USP49-201ENST00000373006 TBCELQ5QJ74 424 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 CTU1Q7Z7A3 348 aaKnown RBP13.8□□□□□ -0.2
USP49-201ENST00000373006 DNAI2Q9GZS0 605 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 SMARCAD1Q9H4L7 1026 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 SPON1Q9HCB6 807 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 VPS45Q9NRW7 570 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 MAGEB16A2A368 324 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 A8MU76 341 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 DLGAP1O14490 977 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 AURKAO14965 403 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 CYP2C8P10632 490 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 TAS2R39P59534 338 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 ESRP1Q6NXG1 681 aaKnown RBP13.8□□□□□ -0.2
USP49-201ENST00000373006 TMEM26Q6ZUK4 368 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 LYSMD3Q7Z3D4 306 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 SLC15A3Q8IY34 581 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 PPP1R14BQ96C90 147 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 NDEL1Q9GZM8 345 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 MRPL46Q9H2W6 279 aaKnown RBP13.8□□□□□ -0.2
USP49-201ENST00000373006 SLC2A6Q9UGQ3 507 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 GJD2Q9UKL4 321 aa13.8□□□□□ -0.2
USP49-201ENST00000373006 NRP2O60462 931 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 TSPAN1O60635 241 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 SRP72O76094 671 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 MT-CYBP00156 380 aaPredicted RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 TXNP10599 105 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 NPY2RP49146 381 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 CSRP3P50461 194 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 TPI1P60174 286 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 BNIP3Q12983 259 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 ARHGAP17Q68EM7 881 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 SLC35B4Q969S0 331 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 TCF12Q99081 682 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 UPF3AQ9H1J1 476 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 HIPK3Q9H422 1215 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 MRPL40Q9NQ50 206 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 H3BMQ9 156 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 OCM2P0CE71 109 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 OCMP0CE72 109 aaPredicted RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 CD97P48960 835 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 PRKAA2P54646 552 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 TRAP1Q12931 704 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 LAMC2Q13753 1193 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 CARTPTQ16568 116 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 DALRD3Q5D0E6 543 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 SAMD4BQ5PRF9 694 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 EPHX4Q8IUS5 362 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 KLRG1Q96E93 195 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 COG8Q96MW5 612 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 ADI1Q9BV57 179 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 NPLQ9BXD5 320 aaPredicted RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 GBA3Q9H227 469 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 ATXN3LQ9H3M9 355 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 CDHR5Q9HBB8 845 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 TMEM181Q9P2C4 612 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 ZNHIT2Q9UHR6 403 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 STAU1O95793 577 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 PSMD8P48556 350 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 CDH17Q12864 832 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 MERTKQ12866 999 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 NEDD8Q15843 81 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 LBX2Q6XYB7 198 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 OR2T34Q8NGX1 318 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 OR2T3Q8NH03 318 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 RPF2Q9H7B2 306 aaKnown RBP13.79□□□□□ -0.2
USP49-201ENST00000373006 POLR1BQ9H9Y6 1135 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 TBC1D23Q9NUY8 699 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 GIMAP2Q9UG22 337 aa13.79□□□□□ -0.2
USP49-201ENST00000373006 HTR3EA5X5Y0 456 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 SOCS7O14512 581 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 ZBTB11O95625 1053 aaPredicted RBP13.78□□□□□ -0.2
USP49-201ENST00000373006 NOS2P35228 1153 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 ADRA1BP35368 520 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 SEPT6Q14141 434 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 CAPRIN1Q14444 709 aaKnown RBP13.78□□□□□ -0.2
USP49-201ENST00000373006 SQLEQ14534 574 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 PLCL1Q15111 1095 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 TGFBIQ15582 683 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 AARS2Q5JTZ9 985 aaKnown RBP13.78□□□□□ -0.2
USP49-201ENST00000373006 SMYD5Q6GMV2 418 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 ERMP1Q7Z2K6 904 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 PIWIL4Q7Z3Z4 852 aaKnown RBP13.78□□□□□ -0.2
USP49-201ENST00000373006 CUZD1Q86UP6 607 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 ANKFN1Q8N957 763 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 TRPM4Q8TD43 1214 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 SLC45A3Q96JT2 553 aa13.78□□□□□ -0.2
USP49-201ENST00000373006 GOLGA2P5Q9HBQ8 144 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms