RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 CYP4X1Q8N118 509 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 LINC01465Q8N7H1 131 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 DCAKDQ8WVC6 231 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 KCTD4Q8WVF5 259 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 MFSD3Q96ES6 412 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 HMCESQ96FZ2 354 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CORO1BQ9BR76 489 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC25A23Q9BV35 468 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CASS4Q9NQ75 786 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PDP2Q9P2J9 529 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 XPR1Q9UBH6 696 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CACNG4Q9UBN1 327 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 GNPTGQ9UJJ9 305 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 RWDD3Q9Y3V2 267 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ADAMTSL1Q8N6G6 1762 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TCRBV7S3A2A0A539 114 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 NCF1BA6NI72 391 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 NCF1CA8MVU1 366 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 GABRDO14764 452 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 KPNA5O15131 536 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 DCXO43602 365 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PLIN3O60664 434 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM155BO75949 473 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 NCF1P14598 390 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 IVDP26440 423 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 HSPA13P48723 471 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 GPX6P59796 221 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TBL3Q12788 808 aaKnown RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PPIGQ13427 754 aaKnown RBP eCLIP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PTK2BQ14289 1009 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CAPRIN1Q14444 709 aaKnown RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PRKD1Q15139 912 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 AGKQ53H12 422 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TSTD2Q5T7W7 516 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 SNX30Q5VWJ9 437 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 METTL21CQ5VZV1 264 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TXNDC11Q6PKC3 985 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ANGPTL8Q6UXH0 198 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TPGS1Q6ZTW0 290 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 C10orf107Q8IVU9 208 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 DEFB107AQ8IZN7 70 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CENPIQ92674 756 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CASP10Q92851 521 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM136AQ96C01 138 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 NRBF2Q96F24 287 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PIWIL1Q96J94 861 aaKnown RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 HHIPL1Q96JK4 782 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CNDP1Q96KN2 507 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 C1orf74Q96LT6 269 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TCF12Q99081 682 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 RHOBTB2Q9BYZ6 727 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ALG9Q9H6U8 611 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 USP29Q9HBJ7 922 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 MID1IP1Q9NPA3 183 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TMPRSS4Q9NRS4 437 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CREBZFQ9NS37 354 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ETAA1Q9NY74 926 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FLRT1Q9NZU1 646 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TBC1D14Q9P2M4 693 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 LRCH1Q9Y2L9 728 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 MRPL42Q9Y6G3 142 aaKnown RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 MYADML2A6NDP7 307 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 QSOX1O00391 747 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM189A1O60320 539 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 MLYCDO95822 493 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 MSH3P20585 1137 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CYP2A7P20853 494 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 NUMBP49757 651 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CCNG1P51959 295 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CACNA2D1P54289 1103 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TLE2Q04725 743 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 PTPRNQ16849 979 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ZDHHC20Q5W0Z9 365 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FSTL4Q6MZW2 842 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 C6orf89Q6UWU4 347 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CERS6Q6ZMG9 384 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 CFAP52Q8N1V2 620 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 SPATA22Q8NHS9 363 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 EME1Q96AY2 570 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 RTP4Q96DX8 246 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 HIC2Q96JB3 615 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FEM1CQ96JP0 617 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TSGA13Q96PP4 275 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 SH3GL1Q99961 368 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 FAM126AQ9BYI3 521 aaPredicted RBP5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 TXLNGYQ9BZA5 131 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ZCWPW1Q9H0M4 648 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ADAM7Q9H2U9 754 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 ARMCX1Q9P291 453 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 AURKCQ9UQB9 309 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 SNX10Q9Y5X0 201 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 SLC4A7Q9Y6M7 1214 aa5.35□□□□□ -1.55
SMNDC1-202ENST00000369603 M0QZQ0 153 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 KATNA1O75449 491 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 MT-CYBP00156 380 aaPredicted RBP5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 HAPLN1P10915 354 aaPredicted RBP5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 CREB1P16220 341 aa5.34□□□□□ -1.55
SMNDC1-202ENST00000369603 DNAJB1P25685 340 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms