RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 PKNOX1P55347 436 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 PTK2BQ14289 1009 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 ACAP2Q15057 778 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 OVOS1Q6IE37 1185 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 FBXL19Q6PCT2 694 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.4□□□□□ -0.1
CD48-201ENST00000368045 RIN3Q8TB24 985 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 SERPINB11Q96P15 392 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 GCNAQ96QF7 691 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 UNC93B1Q9H1C4 597 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 ACSS2Q9NR19 701 aa14.4□□□□□ -0.1
CD48-201ENST00000368045 A8MT66 165 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 TNFRSF10BO14763 440 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SLC7A4O43246 635 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 IGHA2P01877 340 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 C8BP07358 591 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SLC2A3P11169 496 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 CD1EP15812 388 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 HOXB8P17481 243 aaPredicted RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 DPP6P42658 865 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SERPINH1P50454 418 aaKnown RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 SLC5A3P53794 718 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 MLLT6P55198 1093 aaPredicted RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 PSME3P61289 254 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 MS4A2Q01362 244 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 TNK2Q07912 1038 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 TRAP1Q12931 704 aaKnown RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 TLR1Q15399 786 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 CNSTQ6PJW8 725 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 HACD2Q6Y1H2 254 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 AHI1Q8N157 1196 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 UMODL1-AS1Q8N2C9 162 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SCAMP5Q8TAC9 235 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SPPL2BQ8TCT7 592 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 RSPH1Q8WYR4 309 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 CASP10Q92851 521 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 IMP4Q96G21 291 aaKnown RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 ZFRQ96KR1 1074 aaKnown RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 PAAF1Q9BRP4 392 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SPON1Q9HCB6 807 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 TRPC7Q9HCX4 862 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 CPA4Q9UI42 421 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 UBDO15205 165 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 CRTAMO95727 393 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 RGS2P41220 211 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 PGGT1BP53609 377 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 MGAT3Q09327 533 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 TUSC3Q13454 348 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 CSHL1Q14406 222 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 IRAK1BP1Q5VVH5 260 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 CD300LGQ6UXG3 332 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SCD5Q86SK9 330 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 LRRTM3Q86VH5 581 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 SPATA2LQ8IUW3 424 aaPredicted RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 OR10T2Q8NGX3 314 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 USP13Q92995 863 aaPredicted RBP14.39□□□□□ -0.11
CD48-201ENST00000368045 SUSD3Q96L08 255 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 UBXN10Q96LJ8 280 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 MFSD1Q9H3U5 465 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 ZNF696Q9H7X3 374 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 PACSIN3Q9UKS6 424 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 HS3ST4Q9Y661 456 aa14.39□□□□□ -0.11
CD48-201ENST00000368045 TMEM233B4DJY2 109 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 PSMD12O00232 456 aaPredicted RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 CLGNO14967 610 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 DUSP11O75319 330 aaKnown RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 TNFAIP8O95379 198 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 CHRNA1P02708 482 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 SMIM18P0DKX4 95 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 AKR1A1P14550 325 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 RHOQP17081 205 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 PMLP29590 882 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 CHRNA4P43681 627 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 BRCC3P46736 316 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 RPL5P46777 297 aaKnown RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 CREB5Q02930 508 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 LAMB3Q13751 1172 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 TRIM25Q14258 630 aaKnown RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 CCL14Q16627 93 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 RBM20Q5T481 1227 aaKnown RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 AP1ARQ63HQ0 302 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 MSANTD2Q6P1R3 559 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 CUZD1Q86UP6 607 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 SERINC5Q86VE9 423 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 LILRA2Q8N149 483 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 SPATA6LQ8N4H0 392 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 NAT14Q8WUY8 206 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 TMA16Q96EY4 203 aaKnown RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 DUS3LQ96G46 650 aaKnown RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 MARK4Q96L34 752 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 NPAS2Q99743 824 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 OLFM1Q99784 485 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 SLC25A23Q9BV35 468 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 MRPS26Q9BYN8 205 aaKnown RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 COPS7BQ9H9Q2 264 aaPredicted RBP14.38□□□□□ -0.11
CD48-201ENST00000368045 SFMBT1Q9UHJ3 866 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 PCDHGA7Q9Y5G6 932 aa14.38□□□□□ -0.11
CD48-201ENST00000368045 TNPO2O14787 897 aaKnown RBP14.37□□□□□ -0.11
CD48-201ENST00000368045 MSI1O43347 362 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms