RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TXNDC16Q9P2K2 825 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 CACNG4Q9UBN1 327 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 VTI1BQ9UEU0 232 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 TSPAN16Q9UKR8 245 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 FBXL21Q9UKT6 434 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 HEY1Q9Y5J3 304 aa11.66□□□□□ -0.54
USF1-201ENST00000368019 PRSS51A0A1B0GVH4 220 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 ERI2A8K979 691 aaKnown RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 AP3B1O00203 1094 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 PTGESO14684 152 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 TRIM13O60858 407 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 DNAJA2O60884 412 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 LYPLA1O75608 230 aaPredicted RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 CLPTM1O96005 669 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 POLBP06746 335 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 KRT19P08727 400 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 RPL17P18621 184 aaKnown RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 TYK2P29597 1187 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 SERPINB6P35237 376 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 POLD2P49005 469 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 CSRP3P50461 194 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 LIMK2P53671 638 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 NR1H2P55055 460 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 HDAC4P56524 1084 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 RBP5P82980 135 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 CREMQ03060 361 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 TUSC3Q13454 348 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 HTR4Q13639 388 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 DPYSQ14117 519 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 C15orf59Q2T9L4 293 aaPredicted RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 GRAMD1BQ3KR37 738 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 PIGGQ5H8A4 983 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 RALGPS1Q5JS13 557 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 RTP2Q5QGT7 225 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 ARMC3Q5W041 872 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 LPCAT4Q643R3 524 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 FBXL19Q6PCT2 694 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 PRSS55Q6UWB4 352 aaPredicted RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 BNC2Q6ZN30 1099 aaPredicted RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 FRMD7Q6ZUT3 714 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 UNC93AQ86WB7 457 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 C10orf107Q8IVU9 208 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 MPP5Q8N3R9 675 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 SLC25A41Q8N5S1 370 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 CNTD1Q8N815 330 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 RIN3Q8TB24 985 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 CERS2Q96G23 380 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 DUS3LQ96G46 650 aaKnown RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 HEXIM2Q96MH2 286 aaKnown RBP11.65□□□□□ -0.54
USF1-201ENST00000368019 CLSTN3Q9BQT9 956 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 SLC2A11Q9BYW1 496 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 DNAI2Q9GZS0 605 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 CXCL16Q9H2A7 254 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 TMEM216Q9P0N5 145 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 HESX1Q9UBX0 185 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 RIMS3Q9UJD0 308 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 FBXW11Q9UKB1 542 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 DERAQ9Y315 318 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 RAP2CQ9Y3L5 183 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 USP3Q9Y6I4 520 aa11.65□□□□□ -0.54
USF1-201ENST00000368019 DYTNA2CJ06 578 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 TIMM44O43615 452 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 HSPA4LO95757 839 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 ITGB3P05106 788 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 TFAP2AP05549 437 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 NFICP08651 508 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 SERPINB5P36952 375 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 ACADSBP45954 432 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 CDH8P55286 799 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 SULT2A1Q06520 285 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 MTM1Q13496 603 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 SH3PXD2AQ5TCZ1 1133 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 EEF1DP3Q658K8 133 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 NCBP2-AS2Q69YL0 99 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 POU5F2Q8N7G0 328 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 KYQ8NBH2 561 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 GPR152Q8TDT2 470 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 PDCD6IPQ8WUM4 868 aaKnown RBP11.64□□□□□ -0.55
USF1-201ENST00000368019 SLC35F5Q8WV83 523 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 HPDLQ96IR7 371 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 LRGUKQ96M69 825 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 CATSPER2Q96P56 530 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 HAUS8Q9BT25 410 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 IL22Q9GZX6 179 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 LRRC40Q9H9A6 602 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 TBC1D17Q9HA65 648 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 TCF7L2Q9NQB0 619 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 SLC2A4RGQ9NR83 387 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 PNPOQ9NVS9 261 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 UTP6Q9NYH9 597 aaKnown RBP11.64□□□□□ -0.55
USF1-201ENST00000368019 AP4E1Q9UPM8 1137 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 ZFP37Q9Y6Q3 630 aaPredicted RBP11.64□□□□□ -0.55
USF1-201ENST00000368019 CEP250Q9BV73 2442 aa11.64□□□□□ -0.55
USF1-201ENST00000368019 MAGEB16A2A368 324 aa11.63□□□□□ -0.55
USF1-201ENST00000368019 WDR27A2RRH5 827 aa11.63□□□□□ -0.55
USF1-201ENST00000368019 LACTBL1A8MY62 500 aa11.63□□□□□ -0.55
USF1-201ENST00000368019 MATN2O00339 956 aa11.63□□□□□ -0.55
USF1-201ENST00000368019 VILLO15195 856 aa11.63□□□□□ -0.55
USF1-201ENST00000368019 HDAC3O15379 428 aa11.63□□□□□ -0.55
USF1-201ENST00000368019 BCAS2O75934 225 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms