RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 KCNE2Q9Y6J6 123 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 NEDD8-MDP1E9PL57 170 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ZNF143P52747 638 aaPredicted RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 SEMA3CQ99985 751 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 RHOBTB2Q9BYZ6 727 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CD248Q9HCU0 757 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 IKZF3Q9UKT9 509 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 BTBD3Q9Y2F9 522 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 FARP2O94887 1054 aaPredicted RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 UBOX5O94941 541 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ADSLP30566 484 aaPredicted RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 RPL38P63173 70 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 SLC34A1Q06495 639 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 CHSY3Q70JA7 882 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 APTXQ7Z2E3 356 aaKnown RBP15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 EHD3Q9NZN3 535 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 KLF15Q9UIH9 416 aa15.8■□□□□ 0.12
NUCKS1-201ENST00000367142 ATP4AP20648 1035 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 LPOP22079 712 aaPredicted RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 ATP5F1P24539 256 aaPredicted RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 CD52P31358 61 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 MAPKAPK3Q16644 382 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 ZCCHC23Q6ZST2 131 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 OR4A15Q8NGL6 344 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 MORF4L1Q9UBU8 362 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 MTF2Q9Y483 593 aaPredicted RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 DCXO43602 365 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 RBMXL2O75526 392 aaKnown RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 RARAP10276 462 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 BUD31P41223 144 aaPredicted RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 TRIM40Q6P9F5 258 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 GPRIN3Q6ZVF9 776 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 OAFQ86UD1 273 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 RAVER1Q8IY67 606 aaKnown RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 PEX5LQ8IYB4 626 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 CYP2W1Q8TAV3 490 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 LPPQ93052 612 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 RAD51AP1Q96B01 352 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 SEMA3GQ9NS98 782 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 USP20Q9Y2K6 914 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 SNUPNO95149 360 aaKnown RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 HGFP14210 728 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 GABRR2P28476 465 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 MAPK11Q15759 364 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 KIAA0319LQ8IZA0 1049 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 CRELD1Q96HD1 420 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 SEMA6AQ9H2E6 1030 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 STX16-NPEPL1H3BU86 382 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 STX16O14662 325 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 CTPS1P17812 591 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 GLUD2P49448 558 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 TNK2Q07912 1038 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 SMARCB1Q12824 385 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 ITGADQ13349 1161 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 TEAD4Q15561 434 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 ADGRA1Q86SQ6 560 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 CLVS1Q8IUQ0 354 aaPredicted RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 KIAA0895Q8NCT3 520 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 IMP3Q9NV31 184 aaKnown RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 PRODHO43272 600 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 ATP1A4Q13733 1029 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 TARBP2Q15633 366 aaKnown RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 MPPE1Q53F39 396 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 C12orf50Q8NA57 414 aaPredicted RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 C5orf34Q96MH7 638 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 TMEM138Q9NPI0 162 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 EXD2Q9NVH0 621 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 RWDD3Q9Y3V2 267 aa15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
NUCKS1-201ENST00000367142 BUD23O43709 281 aaKnown RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 IDH3BO43837 385 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 SLC28A2O43868 658 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 PLPPR4Q7Z2D5 763 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 RBFAQ8N0V3 343 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ST3GAL5Q9UNP4 418 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 HPSEQ9Y251 543 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 RIC1Q4ADV7 1423 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 TARBP1Q13395 1621 aaKnown RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 SUZ12Q15022 739 aaKnown RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 GALNT18Q6P9A2 607 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 RNF148Q8N7C7 305 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 POU5F2Q8N7G0 328 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 BHLHE22Q8NFJ8 381 aaPredicted RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 IPCEF1Q8WWN9 437 aaPredicted RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 MYO19Q96H55 970 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 KCNK4Q9NYG8 393 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 TBC1D14Q9P2M4 693 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 TAF4O00268 1085 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 PEX11AO75192 247 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 MAFO75444 373 aaPredicted RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 TAS2R41P59536 307 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ATP6V0D1P61421 351 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 SPIBQ01892 262 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 KLHL12Q53G59 568 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 TTC29Q8NA56 475 aaPredicted RBP15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ITCHQ96J02 903 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 OR10H3O60404 316 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ERBB2P04626 1255 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 ZNF846Q147U1 533 aa15.78■□□□□ 0.12
NUCKS1-201ENST00000367142 PTPRNQ16849 979 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms