RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 TTC39CQ8N584 583 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 AFG1LQ8WV93 481 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 WNT8BQ93098 351 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 OSBPL6Q9BZF3 934 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 MRPL46Q9H2W6 279 aaKnown RBP13.69□□□□□ -0.22
PRKN-205ENST00000366897 DDIT4Q9NX09 232 aa13.69□□□□□ -0.22
PRKN-205ENST00000366897 TCRBV3S1A0A5B6 114 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 FAM155AB1AL88 458 aaPredicted RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 SLCO1B7G3V0H7 640 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 NR5A2O00482 541 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 DLGAP1O14490 977 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 XPOTO43592 962 aaKnown RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 PMPCBO75439 489 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 RECQL4O94761 1208 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 CYP2C8P10632 490 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 OXTRP30559 389 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 NOS2P35228 1153 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 TKTL1P51854 596 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 CBX3Q13185 183 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 STX5Q13190 355 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 VGLL4Q14135 290 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 MAP7D1Q3KQU3 841 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 FGD3Q5JSP0 725 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 FBXO47Q5MNV8 452 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 TBCELQ5QJ74 424 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 OGFOD2Q6N063 350 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 TMEM26Q6ZUK4 368 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 PATL1Q86TB9 770 aaKnown RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 CUZD1Q86UP6 607 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 SIX6OS1Q8N1H7 587 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 BBS5Q8N3I7 341 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 RDH11Q8TC12 318 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 MAELQ96JY0 434 aaKnown RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 C3orf30Q96M34 536 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 ULBP1Q9BZM6 244 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 ARMC7Q9H6L4 198 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 RCOR3Q9P2K3 495 aaPredicted RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 CROTQ9UKG9 612 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 DSEQ9UL01 958 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 SSC5DA1L4H1 1573 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 RNF103-CHMP3A0A140T963 221 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 TRPC5OSA6NMA1 111 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 DFFAO00273 331 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 PPP6CO00743 305 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 GIPC1O14908 333 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 SRP72O76094 671 aaKnown RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 SNRPB2P08579 225 aaKnown RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 SOX4Q06945 474 aaPredicted RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 CDH17Q12864 832 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 PMS2P3Q13401 168 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 NEDD8Q15843 81 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 GPRIN1Q7Z2K8 1008 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 GPR180Q86V85 440 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 LZTR1Q8N653 840 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 SMYD1Q8NB12 490 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 SH3RF2Q8TEC5 729 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 TFAP2CQ92754 450 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 MED10Q9BTT4 135 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 FICDQ9BVA6 458 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 ANKRD60Q9BZ19 345 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 RNF39Q9H2S5 420 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 CNOT11Q9UKZ1 510 aaKnown RBP13.68□□□□□ -0.22
PRKN-205ENST00000366897 ANKRD6Q9Y2G4 727 aa13.68□□□□□ -0.22
PRKN-205ENST00000366897 J3QRK9 145 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 SLC22A2O15244 555 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 NRP2O60462 931 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 STAU1O95793 577 aaKnown RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 NCAM1P13591 858 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 ADSLP30566 484 aaPredicted RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 HOXA11P31270 313 aaPredicted RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 GRM5P41594 1212 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 CSRP3P50461 194 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 BNIP3Q12983 259 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 RWDD4Q6NW29 188 aaKnown RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 BEST2Q8NFU1 509 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 IRGQQ8WZA9 623 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 FBXL8Q96CD0 374 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 OLFM1Q99784 485 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 SIK2Q9H0K1 926 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 TUT1Q9H6E5 874 aaKnown RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 WBP1LQ9NX94 342 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 CD300AQ9UGN4 299 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 PAPPA2Q9BXP8 1791 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 SH3PXD2BA1X283 911 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 A8MT66 165 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 UBFD1O14562 309 aaKnown RBP13.67□□□□□ -0.22
PRKN-205ENST00000366897 DAB1O75553 588 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 CES1P23141 567 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 NPY2RP49146 381 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 SLC12A2P55011 1212 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 ESRRGP62508 458 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 NOGQ13253 232 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 PLCL1Q15111 1095 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 VPS26BQ4G0F5 336 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 CYHR1Q6ZMK1 362 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 UNC93AQ86WB7 457 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 THAP11Q96EK4 314 aa13.67□□□□□ -0.22
PRKN-205ENST00000366897 SNX27Q96L92 541 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms