RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SYBUQ9NX95 663 aa19.21■□□□□ 0.67
CMTM3-201ENST00000361909 GOLGA8TH3BQL2 631 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 FUCA1P04066 466 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 GRIA4P48058 902 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 CDH15P55291 814 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 RPS3AP61247 264 aaKnown RBP19.2■□□□□ 0.66
CMTM3-201ENST00000361909 GBE1Q04446 702 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 MGAT3Q09327 533 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ZBTB6Q15916 424 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 UBXN11Q5T124 520 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 FSTL4Q6MZW2 842 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 CHSY3Q70JA7 882 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 STRA8Q7Z7C7 330 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 GRIN3AQ8TCU5 1115 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 LPGAT1Q92604 370 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 PPP1R10Q96QC0 940 aaKnown RBP19.2■□□□□ 0.66
CMTM3-201ENST00000361909 NPAS2Q99743 824 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 FTHL17Q9BXU8 183 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ATAD3AQ9NVI7 634 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 DPP3Q9NY33 737 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 CDC14AQ9UNH5 594 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ADAM23O75077 832 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 CSPG5O95196 566 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 CHRNA1P02708 482 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ITGB3P05106 788 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 KRT19P08727 400 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 GABRB3P28472 473 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 RAP1GAPP47736 663 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 SNX16P57768 344 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 RBP5P82980 135 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 CTBSQ01459 385 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 SQLEQ14534 574 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ARL13AQ5H913 290 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-201ENST00000361909 FAM45BPQ6NSW5 357 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 HMBOX1Q6NT76 420 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 FRA10AC1Q70Z53 315 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 COLGALT1Q8NBJ5 622 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ZSCAN18Q8TBC5 510 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-201ENST00000361909 FAM45AQ8TCE6 357 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 KIF12Q96FN5 646 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 FAR2Q96K12 515 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 GLT1D1Q96MS3 346 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ELOVL4Q9GZR5 314 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 NSMCE4AQ9NXX6 385 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 ERGIC3Q9Y282 383 aa19.2■□□□□ 0.66
CMTM3-201ENST00000361909 LTFP02788 710 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 C2P06681 752 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 ERVK-10P10266 1014 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 CD1EP15812 388 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 CRADDP78560 199 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 MPP1Q00013 466 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 XKR4Q5GH76 650 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 SIX6OS1Q8N1H7 587 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 PELI3Q8N2H9 469 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 MINDY2Q8NBR6 621 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 AGR3Q8TD06 166 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 SEPT8Q92599 483 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 ADI1Q9BV57 179 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 RCOR3Q9P2K3 495 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-201ENST00000361909 CD300AQ9UGN4 299 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 CFAP99D6REC4 459 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 NPHS1O60500 1241 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 DDHD2O94830 711 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 MAP3K6O95382 1288 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 TCN1P20061 433 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-201ENST00000361909 ATXN3P54252 364 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-201ENST00000361909 TMBIM6P55061 237 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 PRKCQQ04759 706 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 GALNT2Q10471 571 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 LRP8Q14114 963 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 CA9Q16790 459 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 PPP6R3Q5H9R7 873 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-201ENST00000361909 GLRA4Q5JXX5 417 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 NANOGP8Q6NSW7 305 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 LCLAT1Q6UWP7 414 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 ARRDC4Q8NCT1 418 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 WNT8BQ93098 351 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 ZUFSPQ96AP4 578 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 C9orf16Q9BUW7 83 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 NXF3Q9H4D5 531 aaKnown RBP19.19■□□□□ 0.66
CMTM3-201ENST00000361909 NOL11Q9H8H0 719 aaKnown RBP19.19■□□□□ 0.66
CMTM3-201ENST00000361909 RMI1Q9H9A7 625 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 LRRC4Q9HBW1 653 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 CACNA2D2Q9NY47 1150 aa19.19■□□□□ 0.66
CMTM3-201ENST00000361909 KIAA1522Q9P206 1035 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-201ENST00000361909 E7ENX8 843 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 PLOD2O00469 737 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 KPNA4O00629 521 aaPredicted RBP19.18■□□□□ 0.66
CMTM3-201ENST00000361909 GPR182O15218 404 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 CNOT3O75175 753 aaKnown RBP19.18■□□□□ 0.66
CMTM3-201ENST00000361909 RECQL4O94761 1208 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 TFPTP0C1Z6 253 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 NELFEP18615 380 aaKnown RBP19.18■□□□□ 0.66
CMTM3-201ENST00000361909 FGFR3P22607 806 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 PTPN9P43378 593 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 CSRP3P50461 194 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 RAB39AQ14964 217 aa19.18■□□□□ 0.66
CMTM3-201ENST00000361909 AARS2Q5JTZ9 985 aaKnown RBP19.18■□□□□ 0.66
CMTM3-201ENST00000361909 ABRAXAS1Q6UWZ7 409 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms