RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.01□□□□□ -0.012e-8■■□□□ 11.7
GABPB1-202ENST00000359031 CHST9Q7L1S5 443 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 MAVSQ7Z434 540 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 DEFB128Q7Z7B8 93 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 TREML1Q86YW5 311 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 TEX9Q8N6V9 391 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 STON2Q8WXE9 905 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 IFT43Q96FT9 208 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 TSPAN17Q96FV3 270 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 TRMT2BQ96GJ1 504 aaKnown RBP15.01□□□□□ -0.01
GABPB1-202ENST00000359031 MYRFLQ96LU7 910 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 GUCD1Q96NT3 240 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 MGME1Q9BQP7 344 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 HERC2P3Q9BVR0 1158 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 GATA5Q9BWX5 397 aaPredicted RBP15.01□□□□□ -0.01
GABPB1-202ENST00000359031 TRPM5Q9NZQ8 1165 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 SEPT3Q9UH03 358 aa15.01□□□□□ -0.01
GABPB1-202ENST00000359031 RUVBL2Q9Y230 463 aaKnown RBP15.01□□□□□ -0.01
GABPB1-202ENST00000359031 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 SPECC1L-ADORA2AF8WAN1 911 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ZNF195O14628 629 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 GSC2O15499 205 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 COCHO43405 550 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 CLDN11O75508 207 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ABLIM3O94929 683 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ENO1P06733 434 aaKnown RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 EZRP15311 586 aaKnown RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 HMGA1P17096 107 aaKnown RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 RPL17P18621 184 aaKnown RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 IDH3AP50213 366 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ATN1P54259 1190 aaPredicted RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 TAS2R39P59534 338 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ACVR1Q04771 509 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 IHHQ14623 411 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 RFTN1Q14699 578 aaPredicted RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 WLSQ5T9L3 541 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 NAPRTQ6XQN6 538 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ATG14Q6ZNE5 492 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 RINLQ6ZS11 566 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 CEP97Q8IW35 865 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 TMEM151AQ8N4L1 468 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 GPATCH11Q8N954 259 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ZNF461Q8TAF7 563 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 MCUR1Q96AQ8 359 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 CLSTN3Q9BQT9 956 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 DRC3Q9H069 523 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 XPR1Q9UBH6 696 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 RIMKLBQ9ULI2 386 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 YIPF1Q9Y548 306 aa15□□□□□ -0.01
GABPB1-202ENST00000359031 ZFP37Q9Y6Q3 630 aaPredicted RBP15□□□□□ -0.01
GABPB1-202ENST00000359031 TARM1B6A8C7 271 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 H3BNC9 293 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 UPP2O95045 317 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 SNUPNO95149 360 aaKnown RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 GJB5O95377 273 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 SEC24AO95486 1093 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 SERPINF2P08697 491 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 SBK3P0C264 359 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 RFC2P35250 354 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 PPP3CCP48454 512 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 PRAMEP78395 509 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 DSG1Q02413 1049 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 RCN2Q14257 317 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 VEPH1Q14D04 833 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 DNAL1Q4LDG9 190 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 CFAP157Q5JU67 520 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 FAM109BQ6ICB4 259 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 RFWD3Q6PCD5 774 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 TMPRSS6Q8IU80 811 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 CFAP52Q8N1V2 620 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 FSTL5Q8N475 847 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 ZNF781Q8N8C0 355 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 TDRD5Q8NAT2 981 aaKnown RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 PRICKLE1Q96MT3 831 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 GPR78Q96P69 363 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 DDX50Q9BQ39 737 aaKnown RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 MRPL46Q9H2W6 279 aaKnown RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 TAS2R1Q9NYW7 299 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 CPSF2Q9P2I0 782 aaKnown RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 UBA2Q9UBT2 640 aaPredicted RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 RAP2CQ9Y3L5 183 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 ANAPC1Q9H1A4 1944 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 ANKRD36A6QL64 1941 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 ILVBLA1L0T0 632 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 CARNS1A5YM72 827 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 PRR5-ARHGAP8B1AHC4 643 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 MUSKO15146 869 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 LDB2O43679 373 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 KDELR3O43731 214 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 PEX11AO75192 247 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 STC2O76061 302 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 LMNAP02545 664 aaKnown RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 CORO1AP31146 461 aaKnown RBP14.99□□□□□ -0.01
GABPB1-202ENST00000359031 SERPINB5P36952 375 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 ALDH1A3P47895 512 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 OXCT1P55809 520 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 ARHGAP8P85298 464 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 PRKAA1Q13131 559 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 TRIM60Q495X7 471 aa14.99□□□□□ -0.01
GABPB1-202ENST00000359031 C1orf53Q5VUE5 145 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms