RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 RNF146Q9NTX7 359 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 NFKBIL1Q9UBC1 381 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CYP27B1O15528 508 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 APOL3O95236 402 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TRIM28Q13263 835 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 SHC3Q92529 594 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM246Q9BRR3 403 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IKZF3Q9UKT9 509 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CSPG4Q6UVK1 2322 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 BTBD19C9JJ37 291 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 KCNH1O95259 989 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 NR2C2P49116 596 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 HARS2P49590 506 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IQSEC1Q6DN90 963 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 KAT5Q92993 513 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 OGDHLQ9ULD0 1010 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 BICRAQ9NZM4 1560 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IFRD1O00458 451 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 KDM4BO94953 1096 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CST1P01037 141 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CHRNB1P11230 501 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 RPS3P23396 243 aaKnown RBP eCLIP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CYP4F2P78329 520 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PTPN11Q06124 597 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CYP4F3Q08477 520 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 RNASEH2BQ5TBB1 312 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ANKS6Q68DC2 871 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 GCNT7Q6ZNI0 430 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 NIM1KQ8IY84 436 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TP63Q9H3D4 680 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ASTN1O14525 1302 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 DCAF15Q66K64 600 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PMF1Q6P1K2 205 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PM20D2Q8IYS1 436 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 GMCL1Q96IK5 515 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 Q96MT0 163 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CAMKK2Q96RR4 588 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 AAR2Q9Y312 384 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 GAKO14976 1311 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 NDUFB10O96000 172 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 HNRNPLP14866 589 aaKnown RBP eCLIP6.11□□□□□ -1.437e-9■■□□□ 14.2
VPS13B-203ENST00000358544 ITGALP20701 1170 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 HSD17B12Q53GQ0 312 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ZC3H12AQ5D1E8 599 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 AADATQ8N5Z0 425 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 RXFP2Q8WXD0 754 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ASIC4Q96FT7 647 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 MMTAG2Q9BU76 263 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 GSDMCQ9BYG8 508 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PCDHGC3Q9UN70 934 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 MDM4O15151 490 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TULP3O75386 442 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 DHFRP00374 187 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 RBL1P28749 1068 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PRKCQQ04759 706 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ANKDD1AQ495B1 522 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ZDHHC24Q6UX98 284 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ANKRD13BQ86YJ7 626 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TNS4Q8IZW8 715 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IPCEF1Q8WWN9 437 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 JPH3Q8WXH2 748 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CNPPD1Q9BV87 410 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IGFBP5P24593 272 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 BST2Q10589 180 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 SULT1C3Q6IMI6 304 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PLEKHG7Q6ZR37 379 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TNFRSF25Q93038 417 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CATSPERBQ9H7T0 1116 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ZDHHC18Q9NUE0 388 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 SNTG2Q9NY99 539 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 SSR3Q9UNL2 185 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 OR14I1A6ND48 311 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 JCHAINP01591 159 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 AOC1P19801 751 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NAGLUP54802 743 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 PON2Q15165 354 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FAM187BQ17R55 369 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF486Q96H40 463 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DHRS1Q96LJ7 313 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ACOX2Q99424 681 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 APBA2Q99767 749 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TUBA1CQ9BQE3 449 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 DDX43Q9NXZ2 648 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FETUBQ9UGM5 382 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 F8VP50 259 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 GUCA1CO95843 209 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 TPH1P17752 444 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SLC7A1P30825 629 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 CDH18Q13634 790 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 VPS26BQ4G0F5 336 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 LIPMQ5VYY2 423 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 KCNT2Q6UVM3 1135 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FAM71AQ8IYT1 594 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 ORAI2Q96SN7 254 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 FAM240BA0A1B0GVZ2 78 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 A8MV72 311 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 RPLP0P05388 317 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 SKIV2LQ15477 1246 aaKnown RBP6.1□□□□□ -1.43
VPS13B-203ENST00000358544 LIN54Q6MZP7 749 aa6.1□□□□□ -1.43
VPS13B-203ENST00000358544 NEPROQ6NW34 567 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms