RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 RABEP2Q9H5N1 569 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 SCUBE2Q9NQ36 999 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 ABCB8Q9NUT2 735 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 NLE1Q9NVX2 485 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 VPS51Q9UID3 782 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 RHOP08100 348 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 MYL4P12829 197 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 HOXB8P17481 243 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 MAPK8P45983 427 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 ZNF140P52738 457 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 KCNC3Q14003 757 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 CNGA3Q16281 694 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 TAX1BP1Q86VP1 789 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 CARNMT1Q8N4J0 409 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 RDH11Q8TC12 318 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 WFDC5Q8TCV5 224 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 USP13Q92995 863 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 C2orf49Q9BVC5 232 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 IQCGQ9H095 443 aaKnown RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 SCN8AQ9UQD0 1980 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 OGNP20774 298 aaKnown RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 IRS1P35568 1242 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 DMC1Q14565 340 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 TAF1AQ15573 450 aaPredicted RBP17.34■□□□□ 0.37
VPS13B-201ENST00000355155 NEPROQ6NW34 567 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 ELMSAN1Q6PJG2 1045 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 SPON2Q9BUD6 331 aa17.34■□□□□ 0.37
VPS13B-201ENST00000355155 ZNF197O14709 1029 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 VAPBO95292 243 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 APOA4P06727 396 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 SLC1A2P43004 574 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 CLCN5P51795 746 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 GPR158Q5T848 1215 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 PLPP6Q8IY26 295 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 PTPRN2Q92932 1015 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 LBHD1Q9BQE6 289 aaPredicted RBP17.33■□□□□ 0.36
VPS13B-201ENST00000355155 IL1RAPL1Q9NZN1 696 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 TBC1D14Q9P2M4 693 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 FBXO5Q9UKT4 447 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 H7C0S8 307 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 RPP40O75818 363 aaKnown RBP17.33■□□□□ 0.36
VPS13B-201ENST00000355155 CRABP2P29373 138 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 POU4F1Q01851 419 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 TYSND1Q2T9J0 566 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 OTOAQ7RTW8 1153 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 MFN1Q8IWA4 741 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 SLC25A41Q8N5S1 370 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 SH3RF2Q8TEC5 729 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 HCFC1R1Q9NWW0 138 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 HACD3Q9P035 362 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 ACTL7AQ9Y615 435 aa17.33■□□□□ 0.36
VPS13B-201ENST00000355155 KIAA0100Q14667 2235 aaKnown RBP17.33■□□□□ 0.36
VPS13B-201ENST00000355155 CCT8L1PA6NM43 557 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 TYK2P29597 1187 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 SLC26A3P40879 764 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 CD151P48509 253 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 PDE1BQ01064 536 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 LMAN2Q12907 356 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 THOC5Q13769 683 aaKnown RBP17.32■□□□□ 0.36
VPS13B-201ENST00000355155 GRM3Q14832 879 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 ATG16L1Q676U5 607 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 RETSATQ6NUM9 610 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 SRLQ86TD4 932 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 CILP2Q8IUL8 1156 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 VOPP1Q96AW1 172 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.32■□□□□ 0.368e-6■■■□□ 18.6
VPS13B-201ENST00000355155 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.32■□□□□ 0.36
VPS13B-201ENST00000355155 CBX4O00257 560 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 HTRA2O43464 458 aaPredicted RBP17.32■□□□□ 0.36
VPS13B-201ENST00000355155 SOCS5O75159 536 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 GJB3O75712 270 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 CRTAMO95727 393 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 PRKAA2P54646 552 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 CDH18Q13634 790 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 TEAD2Q15562 447 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 C10orf82Q8WW14 230 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 SLC2A11Q9BYW1 496 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 CEP44Q9C0F1 390 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 PCDH10Q9P2E7 1040 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 MID2Q9UJV3 735 aa17.32■□□□□ 0.36
VPS13B-201ENST00000355155 SNAP91O60641 907 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 EPCAMP16422 314 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 CD9P21926 228 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 SUOXP51687 545 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 OCRLQ01968 901 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 PPARDQ03181 441 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 GALNTL6Q49A17 601 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 RIN3Q8TB24 985 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 TCEAL4Q96EI5 215 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 PAIP2Q9BPZ3 127 aaKnown RBP17.31■□□□□ 0.36
VPS13B-201ENST00000355155 POPDC3Q9HBV1 291 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 TDP1Q9NUW8 608 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 FBXO10Q9UK96 956 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 HS3ST2Q9Y278 367 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 RAI2Q9Y5P3 530 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 A0A087X1B8 175 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 CYBBP04839 570 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 C2P06681 752 aa17.31■□□□□ 0.36
VPS13B-201ENST00000355155 CORO7P57737 925 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms