RNA–Protein interactions for RNA: ENST00000354725.7

SND1-201, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SND1, Length 3,476 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-201ENST00000354725 APOC2P02655 101 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 KRT15P19012 456 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 TNNI1P19237 187 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UBA1P22314 1058 aaKnown RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 HSD3B2P26439 372 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 PMLP29590 882 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 PGM1P36871 562 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 LIMK1P53667 647 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 OTUD4Q01804 1114 aaKnown RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 CCDC28AQ8IWP9 274 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 FBXO36Q8NEA4 188 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 ACTL9Q8TC94 416 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 RNF139Q8WU17 664 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 C7orf26Q96N11 449 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 GPAMQ9HCL2 828 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 NPHS2Q9NP85 383 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 ZFP57Q9NU63 452 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 TAS2R1Q9NYW7 299 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 ANKMY1Q9P2S6 941 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 MTO1Q9Y2Z2 717 aaKnown RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A9O60656 530 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 MAGEC1O60732 1142 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 KCNH1O95259 989 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A6P19224 532 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A1P22309 533 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A4P22310 534 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 PRKCHP24723 683 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A3P35503 534 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A5P35504 534 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 PTPN9P43378 593 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 TPTEP56180 551 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 TLR1Q15399 786 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 LY6KQ17RY6 165 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 PTPN20Q4JDL3 420 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 LPCAT4Q643R3 524 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 URGCPQ8TCY9 931 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A7Q9HAW7 530 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A10Q9HAW8 530 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UGT1A8Q9HAW9 530 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 SIRPGQ9P1W8 387 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 DENRO43583 198 aaKnown RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 SNNO75324 88 aaPredicted RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 CHRM5P08912 532 aaPredicted RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 AKR1A1P14550 325 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 HOXC8P31273 242 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 POLR2GP62487 172 aaKnown RBP eCLIP10.92□□□□□ -0.66
SND1-201ENST00000354725 TRMT5Q32P41 509 aaKnown RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 CELF3Q5SZQ8 465 aaKnown RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 DNAJC24Q6P3W2 148 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 CLEC2AQ6UVW9 174 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 RIPOR1Q6ZS17 1223 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 DHDDSQ86SQ9 333 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 UNC45BQ8IWX7 931 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 RAB3IL1Q8TBN0 382 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 APBB2Q92870 758 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 NSL1Q96IY1 281 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 ZNF641Q96N77 438 aaPredicted RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 PCYT2Q99447 389 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 CCDC106Q9BWC9 280 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 CISHQ9NSE2 258 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 STMN3Q9NZ72 180 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 TEKT2Q9UIF3 430 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 CPSF3Q9UKF6 684 aaKnown RBP10.92□□□□□ -0.66
SND1-201ENST00000354725 ERVK-19Q9WJR5 959 aa10.92□□□□□ -0.66
SND1-201ENST00000354725 GSTTP1A0A1W2PQM5 241 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 TCRBV9S1A1TA0A576 114 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 hCG_2039718K7EN88 272 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 SPAG6O75602 509 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 MYCLP12524 364 aaPredicted RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 RFC1P35251 1148 aaPredicted RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 PHC1P78364 1004 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 LAMC2Q13753 1193 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 XYLT1Q86Y38 959 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 TMEM35BQ8NCS4 154 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 NIF3L1Q9GZT8 377 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 HMX1Q9NP08 348 aaPredicted RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 SEPT9Q9UHD8 586 aaPredicted RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 COL4A4P53420 1690 aaPredicted RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 E5RJQ4 531 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 CHADO15335 359 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 GSRP00390 522 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 ICAM2P13598 275 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 ACTR3P61158 418 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 CAPSQ13938 189 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 LSM12Q3MHD2 195 aaKnown RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 C6orf163Q5TEZ5 329 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 OR6C4Q8NGE1 309 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 COPS5Q92905 334 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 MCRS1Q96EZ8 462 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 GHITMQ9H3K2 345 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 BRD7Q9NPI1 651 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 GTF2IRD1Q9UHL9 959 aa10.91□□□□□ -0.66
SND1-201ENST00000354725 ZNF638Q14966 1978 aaKnown RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 LAMA2P24043 3122 aaKnown RBP10.91□□□□□ -0.66
SND1-201ENST00000354725 TAF4O00268 1085 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 FKBP6O75344 327 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 MT-ND3P03897 115 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 KRT7P08729 469 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 CCDC130P13994 396 aa10.9□□□□□ -0.66
SND1-201ENST00000354725 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms