RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ATP4AP20648 1035 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 ECHS1P30084 290 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 NR2C2P49116 596 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 DUSP4Q13115 394 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 MAD2L1Q13257 205 aaPredicted RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 BBS12Q6ZW61 710 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 ZFP28Q8NHY6 868 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 CDT1Q9H211 546 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 TRPC4Q9UBN4 977 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 SUCOQ9UBS9 1254 aaKnown RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 SOX13Q9UN79 622 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 COLEC10Q9Y6Z7 277 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 PHGDHO43175 533 aaKnown RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 OR10H2O60403 315 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 PSMB4P28070 264 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 GDI1P31150 447 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 MGAT5Q09328 741 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 MPP3Q13368 585 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 PDGFRLQ15198 375 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 SEL1L3Q68CR1 1132 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 LRRC69Q6ZNQ3 347 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 RABEPKQ7Z6M1 372 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 SETD3Q86TU7 594 aaPredicted RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 RIT1Q92963 219 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 FAM162AQ96A26 154 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 KLHL4Q9C0H6 718 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 RAD21L1Q9H4I0 556 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 VTI1BQ9UEU0 232 aa10.97□□□□□ -0.65
CLCN6-202ENST00000346436 PHRF1Q9P1Y6 1649 aaKnown RBP10.97□□□□□ -0.65
CLCN6-202ENST00000346436 LAMB4A4D0S4 1761 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 HACD1B0YJ81 288 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 CLDN11O75508 207 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 VARSP26640 1264 aaKnown RBP10.96□□□□□ -0.65
CLCN6-202ENST00000346436 CSHL1Q14406 222 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 TRMT5Q32P41 509 aaKnown RBP10.96□□□□□ -0.65
CLCN6-202ENST00000346436 TMC5Q6UXY8 1006 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 TAS2R13Q9NYV9 303 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.96□□□□□ -0.65
CLCN6-202ENST00000346436 HCN3Q9P1Z3 774 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 PDP2Q9P2J9 529 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 SNX13Q9Y5W8 968 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 MYH7P12883 1935 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 SLIT2O94813 1529 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 AGRPO00253 132 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 SUPT7LO94864 414 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 EEF1DP29692 281 aaKnown RBP10.96□□□□□ -0.65
CLCN6-202ENST00000346436 ALDH9A1P49189 494 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 DGKGP49619 791 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 CCNG1P51959 295 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 FUT11Q495W5 492 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 ABHD15Q6UXT9 468 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 HORMAD1Q86X24 394 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 NAT16Q8N8M0 369 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 KLHL23Q8NBE8 558 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 ZNF333Q96JL9 665 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 ZNF317Q96PQ6 595 aaPredicted RBP10.96□□□□□ -0.65
CLCN6-202ENST00000346436 RNF157Q96PX1 679 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 SLC38A3Q99624 504 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 MYOCQ99972 504 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 C17orf80Q9BSJ5 609 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 XPNPEP1Q9NQW7 623 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 TMCC3Q9ULS5 477 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 LRCH1Q9Y2L9 728 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 NWD2Q9ULI1 1742 aa10.96□□□□□ -0.65
CLCN6-202ENST00000346436 MGRN1O60291 552 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 LRCH4O75427 683 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 LYPLA2O95372 231 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 UNGP13051 313 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 CDKN2BP42772 138 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 ZNF143P52747 638 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 WDR4P57081 412 aaKnown RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 CYLC2Q14093 348 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 LRRC38Q5VT99 294 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 CLNKQ7Z7G1 428 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 OR52K1Q8NGK4 314 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 PXYLP1Q8TE99 480 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 ELMO1Q92556 727 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 PHF21BQ96EK2 531 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 SCLYQ96I15 445 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 CCT7Q99832 543 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 OSBPL10Q9BXB5 764 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 NMUR2Q9GZQ4 415 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 CHKBQ9Y259 395 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 A0A096LPK6 155 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 NCF1BA6NI72 391 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 NCF1CA8MVU1 366 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 NCF1P14598 390 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 MSX2P35548 267 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 PLK1P53350 603 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 TRIM60Q495X7 471 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 BNC2Q6ZN30 1099 aaPredicted RBP10.96□□□□□ -0.66
CLCN6-202ENST00000346436 RIPOR1Q6ZS17 1223 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 ANKS1BQ7Z6G8 1248 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 OR10G6Q8NH81 332 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 ING5Q8WYH8 240 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 ERLEC1Q96DZ1 483 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 TCF7L2Q9NQB0 619 aa10.96□□□□□ -0.66
CLCN6-202ENST00000346436 SERPINE1P05121 402 aa10.95□□□□□ -0.66
CLCN6-202ENST00000346436 PABPC1P11940 636 aaKnown RBP10.95□□□□□ -0.66
CLCN6-202ENST00000346436 CYP3A5P20815 502 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms