RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 K7ESM1 405 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 INSIG1O15503 277 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 MMP20O60882 483 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 GIMD1P0DJR0 217 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 BLKP51451 505 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 TLE3Q04726 772 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 CYTH1Q15438 398 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 INO80DQ53TQ3 878 aaPredicted RBP12.56□□□□□ -0.4
SGCA-202ENST00000344627 TDRD12Q587J7 1177 aaKnown RBP12.56□□□□□ -0.4
SGCA-202ENST00000344627 PLEKHA7Q6IQ23 1121 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 VPS36Q86VN1 386 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 SLC22A18ASQ8N1D0 253 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 UMODL1-AS1Q8N2C9 162 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 HCAR2Q8TDS4 363 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 NAT6Q93015 286 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 HIC2Q96JB3 615 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 WRAP53Q9BUR4 548 aaKnown RBP12.56□□□□□ -0.4
SGCA-202ENST00000344627 C1QTNF2Q9BXJ5 285 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 TRIM7Q9C029 511 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 CAAP1Q9H8G2 361 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 AIPL1Q9NZN9 384 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 SPASTQ9UBP0 616 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 PCDHGA8Q9Y5G5 932 aa12.56□□□□□ -0.4
SGCA-202ENST00000344627 SYCE3A1L190 88 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 EME2A4GXA9 379 aaPredicted RBP12.55□□□□□ -0.4
SGCA-202ENST00000344627 TMEM191CA6NGB0 347 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 TMEM110-MUSTN1A8MSY1 372 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 J3KR12 359 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 DFFAO00273 331 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 DDX3XO00571 662 aaKnown RBP eCLIP12.55□□□□□ -0.4
SGCA-202ENST00000344627 AQP9O43315 295 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 TM7SF2O76062 418 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 PIGNO95427 931 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 GZMAP12544 262 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 TIMP2P16035 220 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 ITIH2P19823 946 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 ITPKBP27987 946 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 MIPP30301 263 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 HTR7P34969 479 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 PAPOLAP51003 745 aaKnown RBP12.55□□□□□ -0.4
SGCA-202ENST00000344627 NDST2P52849 883 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 PDE1CQ14123 709 aaPredicted RBP12.55□□□□□ -0.4
SGCA-202ENST00000344627 GRM3Q14832 879 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 CA9Q16790 459 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 KDM7AQ6ZMT4 941 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 SPACA3Q8IXA5 215 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 OR6C4Q8NGE1 309 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 MAPK15Q8TD08 544 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 CPLX3Q8WVH0 158 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 SNRNP27Q8WVK2 155 aaKnown RBP12.55□□□□□ -0.4
SGCA-202ENST00000344627 TRIM11Q96F44 468 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 KCTD15Q96SI1 283 aaPredicted RBP12.55□□□□□ -0.4
SGCA-202ENST00000344627 IL12RB2Q99665 862 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 SYT11Q9BT88 431 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 SNRNP25Q9BV90 132 aaKnown RBP12.55□□□□□ -0.4
SGCA-202ENST00000344627 SLC39A8Q9C0K1 460 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 SP110Q9HB58 689 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 CBX8Q9HC52 389 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 MRPL47Q9HD33 250 aaKnown RBP12.55□□□□□ -0.4
SGCA-202ENST00000344627 SCINQ9Y6U3 715 aa12.55□□□□□ -0.4
SGCA-202ENST00000344627 ANKRD36A6QL64 1941 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 FASNP49327 2511 aaKnown RBP12.54□□□□□ -0.4
SGCA-202ENST00000344627 GOLGA6L19H0YKK7 550 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 PALMO75781 387 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 NEBLO76041 1014 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 MYF5P13349 255 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 JUNDP17535 347 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 RBMS1P29558 406 aaKnown RBP12.54□□□□□ -0.4
SGCA-202ENST00000344627 PRKCIP41743 596 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 PEX5P50542 639 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 THOP1P52888 689 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 UBASH3AP57075 661 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 PFN3P60673 137 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 GABREP78334 506 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 FANCCQ00597 558 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 EIF3IQ13347 325 aaKnown RBP12.54□□□□□ -0.4
SGCA-202ENST00000344627 FZD2Q14332 565 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 NR1I3Q14994 352 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 IQCB1Q15051 598 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 NR0B2Q15466 257 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 NFKBIBQ15653 356 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 E4F1Q66K89 784 aaPredicted RBP12.54□□□□□ -0.4
SGCA-202ENST00000344627 LVRNQ6Q4G3 990 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 XKR5Q6UX68 686 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 LUZP1Q86V48 1076 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 ZNF548Q8NEK5 533 aaPredicted RBP12.54□□□□□ -0.4
SGCA-202ENST00000344627 ATL2Q8NHH9 583 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 IFI44Q8TCB0 444 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 SCG3Q8WXD2 468 aaKnown RBP12.54□□□□□ -0.4
SGCA-202ENST00000344627 PEBP4Q96S96 227 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 CINPQ9BW66 212 aaPredicted RBP12.54□□□□□ -0.4
SGCA-202ENST00000344627 EDEM3Q9BZQ6 932 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 SUV39H2Q9H5I1 410 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 LRRC19Q9H756 370 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 DKK3Q9UBP4 350 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 LHX3Q9UBR4 397 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 COQ6Q9Y2Z9 468 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 MFHAS1Q9Y4C4 1052 aa12.54□□□□□ -0.4
SGCA-202ENST00000344627 SHROOM3Q8TF72 1996 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms