RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 VITQ6UXI7 678 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 TMEM135Q86UB9 458 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 SLC26A11Q86WA9 606 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 MFSD6LQ8IWD5 586 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 CPA6Q8N4T0 437 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 ARFGAP2Q8N6H7 521 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 LPCAT1Q8NF37 534 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 PTCD2Q8WV60 388 aaKnown RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 CERS2Q96G23 380 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 UHRF1Q96T88 793 aaPredicted RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 KIFC1Q9BW19 673 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 ECT2Q9H8V3 914 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 PLAC1Q9HBJ0 212 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 ZFATQ9P243 1243 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 LGALS13Q9UHV8 139 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 SLC8A2Q9UPR5 921 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 TCAF1Q9Y4C2 921 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 IQANK1A0A1B0GTG1 560 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 TRIM24O15164 1050 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 ERVK-10P10266 1014 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 SRCP12931 536 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 PSMC3P17980 439 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 NMBRP28336 390 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 GCAP28676 217 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 EPHB1P54762 984 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 MGAT5Q09328 741 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 LAMB3Q13751 1172 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 ZNF771Q7L3S4 317 aaPredicted RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 UNC5BQ8IZJ1 945 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 TTC8Q8TAM2 541 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 TLCD1Q96CP7 247 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 FCRL3Q96P31 734 aaPredicted RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 SELENOSQ9BQE4 189 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 TDRD1Q9BXT4 1180 aaKnown RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 MOCS1Q9NZB8 636 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 IL1RAPL1Q9NZN1 696 aa17.49■□□□□ 0.39
CLDN4-201ENST00000340958 EVLQ9UI08 416 aaPredicted RBP17.49■□□□□ 0.39
CLDN4-201ENST00000340958 CXorf51AA0A1B0GTR3 108 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 CXorf49A8MYA2 514 aaPredicted RBP17.48■□□□□ 0.39
CLDN4-201ENST00000340958 ALDH1A2O94788 518 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 ATP5BP06576 529 aaKnown RBP17.48■□□□□ 0.39
CLDN4-201ENST00000340958 ATXN1LP0C7T5 689 aaKnown RBP17.48■□□□□ 0.39
CLDN4-201ENST00000340958 SP100P23497 879 aaPredicted RBP17.48■□□□□ 0.39
CLDN4-201ENST00000340958 RECQLP46063 649 aaPredicted RBP17.48■□□□□ 0.39
CLDN4-201ENST00000340958 ATP1A2P50993 1020 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 BCL2L1Q07817 233 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 GEN1Q17RS7 908 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 ADGRD1Q6QNK2 874 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 CYS1Q717R9 158 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 ADIPOR2Q86V24 386 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 SRRM1Q8IYB3 904 aaKnown RBP17.48■□□□□ 0.39
CLDN4-201ENST00000340958 CYP4X1Q8N118 509 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 WFIKKN2Q8TEU8 576 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 SLC44A1Q8WWI5 657 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 NECTIN4Q96NY8 510 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 FAM83CQ9BQN1 747 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 DEC1Q9P2X7 70 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 HS3ST2Q9Y278 367 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 MYOFQ9NZM1 2061 aa17.48■□□□□ 0.39
CLDN4-201ENST00000340958 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.47■□□□□ 0.39
CLDN4-201ENST00000340958 FAM159BA6NKW6 160 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 TULP3O75386 442 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ALADP13716 330 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 PPARDQ03181 441 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ZP2Q05996 745 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 GRAMD4Q6IC98 578 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 C22orf39Q6P5X5 142 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 PARM1Q6UWI2 310 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 KCNMB4Q86W47 210 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 OR2AP1Q8NGE2 309 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 CYB5D2Q8WUJ1 264 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 DCAKDQ8WVC6 231 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ELSPBP1Q96BH3 223 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 CEP44Q9C0F1 390 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 MRM3Q9HC36 420 aaKnown RBP17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ERVW-1Q9UQF0 538 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 PIRTP0C851 137 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ST8SIA6P61647 398 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 PPP2R2AP63151 447 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 KDSRQ06136 332 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 RAD51Q06609 339 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 FCHO2Q0JRZ9 810 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 DLG2Q15700 870 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 DGKKQ5KSL6 1271 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ARMC12Q5T9G4 340 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 PDPK2PQ6A1A2 396 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 NLRP9Q7RTR0 991 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 C12orf40Q86WS4 652 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ADHFE1Q8IWW8 467 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ZNF778Q96MU6 729 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 DHRS4Q9BTZ2 278 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 ATP13A3Q9H7F0 1226 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 KCNK9Q9NPC2 374 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 SMYD2Q9NRG4 433 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.47■□□□□ 0.39
CLDN4-201ENST00000340958 PRKAG3Q9UGI9 489 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 SLCO3A1Q9UIG8 710 aa17.47■□□□□ 0.39
CLDN4-201ENST00000340958 PLA2G4CQ9UP65 541 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms