RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 ASB12Q8WXK4 309 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 TSACCQ96A04 125 aaPredicted RBP13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 ZNF653Q96CK0 615 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 IFT43Q96FT9 208 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 CLPBQ9H078 707 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 NLGN3Q9NZ94 848 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 DKK3Q9UBP4 350 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 RAI2Q9Y5P3 530 aa13.5□□□□□ -0.25
NUDCD3-201ENST00000338427 ITPR1Q14643 2758 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 A0A1W2PQC6 194 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 SYCE3A1L190 88 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 NEMP2A6NFY4 417 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 RIOK3O14730 519 aaKnown RBP13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 FGF10O15520 208 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 AQP9O43315 295 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 LRCH4O75427 683 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 PALMO75781 387 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 CDK4P11802 303 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 GZMAP12544 262 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 TGM2P21980 687 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 XPAP23025 273 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 LIG3P49916 1009 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 NDST2P52849 883 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 AIF1P55008 147 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 FANCCQ00597 558 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 E2F1Q01094 437 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 RTP5Q14D33 572 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 PTPRRQ15256 657 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 IRF4Q15306 451 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 UGP2Q16851 508 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 SMTNL2Q2TAL5 461 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 SOWAHCQ53LP3 525 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 PRRT3Q5FWE3 981 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 PERM1Q5SV97 790 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 FAXCQ5TGI0 409 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 AFMIDQ63HM1 303 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 HGSNATQ68CP4 663 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 GUSBP11Q6P575 273 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 RFX8Q6ZV50 586 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 RD3Q7Z3Z2 195 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 PARGQ86W56 976 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 CPNE8Q86YQ8 564 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 DCBLD1Q8N8Z6 715 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 PLA2G15Q8NCC3 412 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 IFI44Q8TCB0 444 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 RFFLQ8WZ73 363 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 BBC3Q96PG8 261 aaPredicted RBP13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 NCAPGQ9BPX3 1015 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 ISCUQ9H1K1 167 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 ZWILCHQ9H900 591 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
NUDCD3-201ENST00000338427 BPTFQ12830 3046 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 ARHGAP42A6NI28 874 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 YY2O15391 372 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 PRPSAP2O60256 369 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 BRINP1O60477 761 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 RNF8O76064 485 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 TSHRP16473 764 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 SCNN1BP51168 640 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 THOP1P52888 689 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 SLC10A7Q0GE19 358 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 INPP5AQ14642 412 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 HS1BP3Q53T59 392 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 FAM182AQ5T1J6 154 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 CDCP2Q5VXM1 449 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 EFL1Q7Z2Z2 1120 aaKnown RBP13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 HID1Q8IV36 788 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 PELI3Q8N2H9 469 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 FAM181AQ8N9Y4 354 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 FAM174AQ8TBP5 190 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 HSPH1Q92598 858 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 APOOQ9BUR5 198 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 OR1A2Q9Y585 309 aa13.48□□□□□ -0.25
NUDCD3-201ENST00000338427 A0A087WV48 116 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 A0A0U1RQS6 177 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 PMS2P1A4D2B8 440 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 LZTS3O60299 673 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 MPOP05164 745 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 PCCBP05166 539 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 RARAP10276 462 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 ALPPL2P10696 532 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 C6P13671 934 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 GM2AP17900 193 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 PBX1P40424 430 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 COL9A2Q14055 689 aaPredicted RBP13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 DPYSQ14117 519 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 LRRC14Q15048 493 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 ATP13A4Q4VNC1 1196 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 ENPP7Q6UWV6 458 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 SFTPA2Q8IWL1 248 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 SLC35F3Q8IY50 421 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 PGBD5Q8N414 524 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 DENND6BQ8NEG7 585 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 MAPK15Q8TD08 544 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 LRRN4Q8WUT4 740 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 ARHGEF26Q96DR7 871 aa13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 NAF1Q96HR8 494 aaKnown RBP13.47□□□□□ -0.25
NUDCD3-201ENST00000338427 IL12RB2Q99665 862 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms